RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 NMUR2Q9GZQ4 415 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 SAP130Q9H0E3 1048 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 GSTO2Q9H4Y5 243 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 CA10Q9NS85 328 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 MOKQ9UQ07 419 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 SLC9A8Q9Y2E8 581 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 LRP5LA4QPB2 252 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 DUXAA6NLW8 204 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 ESPNB1AK53 854 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 B4DSR2 109 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 FAM157AC9JC47 383 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 CYP7B1O75881 506 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 URI1O94763 535 aaPredicted RBP7.85□□□□□ -1.15
SMG6-218ENST00000575454 CHEK2O96017 543 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 AK1P00568 194 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 OR4A8P0C604 315 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 DAOP14920 347 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 EGR1P18146 543 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 SDC1P18827 310 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 HPCAL1P37235 193 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 HTR3AP46098 478 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 CCT3P49368 545 aaKnown RBP7.85□□□□□ -1.15
SMG6-218ENST00000575454 KHKP50053 298 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 CDH15P55291 814 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 ZNF141Q15928 474 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 LSM12Q3MHD2 195 aaKnown RBP7.85□□□□□ -1.15
SMG6-218ENST00000575454 ZNF385BQ569K4 471 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 CASP12Q6UXS9 341 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 ANKS4BQ8N8V4 417 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 POMGNT2Q8NAT1 580 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 OR4F15Q8NGB8 312 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 OR52E4Q8NGH9 312 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 PSMA8Q8TAA3 256 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 ACMSDQ8TDX5 336 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 FAM216AQ8WUB2 273 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 OR5P2Q8WZ92 322 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 FCRL1Q96LA6 429 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 TSSK3Q96PN8 268 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 ZNF317Q96PQ6 595 aaPredicted RBP7.85□□□□□ -1.15
SMG6-218ENST00000575454 JMJD8Q96S16 334 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 NAA11Q9BSU3 229 aaPredicted RBP7.85□□□□□ -1.15
SMG6-218ENST00000575454 THUMPD3Q9BV44 507 aaKnown RBP7.85□□□□□ -1.15
SMG6-218ENST00000575454 QRSL1Q9H0R6 528 aaKnown RBP7.85□□□□□ -1.15
SMG6-218ENST00000575454 CDC42EP4Q9H3Q1 356 aaKnown RBP7.85□□□□□ -1.15
SMG6-218ENST00000575454 PLK3Q9H4B4 646 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 ANKZF1Q9H8Y5 726 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 ATAD3AQ9NVI7 634 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 CHRNA9Q9UGM1 479 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 DCDC2Q9UHG0 476 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 TRAPPC4Q9Y296 219 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 CCL27Q9Y4X3 112 aa7.85□□□□□ -1.15
SMG6-218ENST00000575454 CADP27708 2225 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 EXOC1LA0A1B0GW35 172 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 TMEM89A2RUT3 159 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 TMEM114B3SHH9 223 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 TRIM77I1YAP6 450 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 LILRA1O75019 489 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 VENTXO95231 258 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 CSTAP01040 98 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 MYL2P10916 166 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 CREB1P16220 341 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 MAPK1P28482 360 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 LIMS1P48059 325 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 RNF144AP50876 292 aaPredicted RBP7.84□□□□□ -1.15
SMG6-218ENST00000575454 MAP2K6P52564 334 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 OR2B6P58173 313 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 DNAJB13P59910 316 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 UBE2NP61088 152 aaKnown RBP7.84□□□□□ -1.15
SMG6-218ENST00000575454 SLC35A1P78382 337 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 LGALS3BPQ08380 585 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 SKP2Q13309 424 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 ADIPOQQ15848 244 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 NDUFAF6Q330K2 333 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 C3orf36Q3SXR2 165 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 PDZK1Q5T2W1 519 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 C8orf74Q6P047 294 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 RNF165Q6ZSG1 346 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 FRMD7Q6ZUT3 714 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 USP43Q70EL4 1123 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 GRINAQ7Z429 371 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 GLCCI1Q86VQ1 547 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 ZNF786Q8N393 782 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 FAM169BQ8N8A8 192 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 SEMA6DQ8NFY4 1073 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 ZNF563Q8TA94 476 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 SFXN5Q8TD22 340 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 WDR60Q8WVS4 1066 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 PMM1Q92871 262 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 ANKRD27Q96NW4 1050 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 SLC38A2Q96QD8 506 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 PRPF18Q99633 342 aaKnown RBP7.84□□□□□ -1.15
SMG6-218ENST00000575454 SOX7Q9BT81 388 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 CCDC106Q9BWC9 280 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 RBM4Q9BWF3 364 aaKnown RBP7.84□□□□□ -1.15
SMG6-218ENST00000575454 PIF1Q9H611 641 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 METTL17Q9H7H0 456 aaPredicted RBP7.84□□□□□ -1.15
SMG6-218ENST00000575454 SIRT3Q9NTG7 399 aaPredicted RBP7.84□□□□□ -1.15
SMG6-218ENST00000575454 GPATCH2Q9NW75 528 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 TMEM45AQ9NWC5 275 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 TMEM181Q9P2C4 612 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms