RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 BLMHQ13867 455 aa21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 TOMM20Q15388 145 aa21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 TTC33Q6PID6 262 aaPredicted RBP21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 PRICKLE2Q7Z3G6 844 aa21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 ZER1Q7Z7L7 766 aa21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 GALNT5Q7Z7M9 940 aa21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 PIGXQ8TBF5 258 aa21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 HS6ST2Q96MM7 605 aa21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 C12orf10Q9HB07 376 aa21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 C8orf4Q9NR00 106 aa21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 MED31Q9Y3C7 131 aa21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 TNRC6AQ8NDV7 1962 aaKnown RBP21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 IGKV1D-42A0A075B6H8 117 aa21.78■■□□□ 1.08
ATPAF1-213ENST00000574428 TMED7-TICAM2A0A0A6YYA0 188 aa21.78■■□□□ 1.08
ATPAF1-213ENST00000574428 MKRN2OSH3BPM6 223 aa21.78■■□□□ 1.08
ATPAF1-213ENST00000574428 HPRP00739 348 aa21.78■■□□□ 1.08
ATPAF1-213ENST00000574428 ANXA8P13928 327 aa21.78■■□□□ 1.08
ATPAF1-213ENST00000574428 IGFBP5P24593 272 aa21.78■■□□□ 1.08
ATPAF1-213ENST00000574428 CXCR1P25024 350 aa21.78■■□□□ 1.08
ATPAF1-213ENST00000574428 MEOX1P50221 254 aa21.78■■□□□ 1.08
ATPAF1-213ENST00000574428 IL1RL1Q01638 556 aa21.78■■□□□ 1.08
ATPAF1-213ENST00000574428 KDM4DQ6B0I6 523 aa21.78■■□□□ 1.08
ATPAF1-213ENST00000574428 LINC00471Q8N535 108 aa21.78■■□□□ 1.08
ATPAF1-213ENST00000574428 TMEM178AQ8NBL3 297 aa21.78■■□□□ 1.08
ATPAF1-213ENST00000574428 POC1BQ8TC44 478 aa21.78■■□□□ 1.08
ATPAF1-213ENST00000574428 TM9SF4Q92544 642 aa21.78■■□□□ 1.08
ATPAF1-213ENST00000574428 FAM46AQ96IP4 442 aaKnown RBP21.78■■□□□ 1.08
ATPAF1-213ENST00000574428 MEPEQ9NQ76 525 aaPredicted RBP21.78■■□□□ 1.08
ATPAF1-213ENST00000574428 C20orf141Q9NUB4 165 aa21.78■■□□□ 1.08
ATPAF1-213ENST00000574428 RPH3AQ9Y2J0 694 aaPredicted RBP21.78■■□□□ 1.08
ATPAF1-213ENST00000574428 TMED7Q9Y3B3 224 aa21.78■■□□□ 1.08
ATPAF1-213ENST00000574428 KLRC4-KLRK1H3BQV0 150 aa21.77■■□□□ 1.08
ATPAF1-213ENST00000574428 K7EM74 188 aa21.77■■□□□ 1.08
ATPAF1-213ENST00000574428 ETV2O00321 342 aaPredicted RBP21.77■■□□□ 1.08
ATPAF1-213ENST00000574428 HK1P19367 917 aa21.77■■□□□ 1.08
ATPAF1-213ENST00000574428 HTR3AP46098 478 aa21.77■■□□□ 1.08
ATPAF1-213ENST00000574428 DLX5P56178 289 aa21.77■■□□□ 1.08
ATPAF1-213ENST00000574428 PDK3Q15120 406 aa21.77■■□□□ 1.08
ATPAF1-213ENST00000574428 ADGRG3Q86Y34 549 aa21.77■■□□□ 1.08
ATPAF1-213ENST00000574428 ZADH2Q8N4Q0 377 aa21.77■■□□□ 1.08
ATPAF1-213ENST00000574428 MARVELD2Q8N4S9 558 aa21.77■■□□□ 1.08
ATPAF1-213ENST00000574428 SNRNP27Q8WVK2 155 aaKnown RBP21.77■■□□□ 1.08
ATPAF1-213ENST00000574428 MRGPRX4Q96LA9 322 aa21.77■■□□□ 1.08
ATPAF1-213ENST00000574428 GPA33Q99795 319 aa21.77■■□□□ 1.08
ATPAF1-213ENST00000574428 KRT84Q9NSB2 600 aa21.77■■□□□ 1.08
ATPAF1-213ENST00000574428 MGAT4BQ9UQ53 548 aa21.77■■□□□ 1.08
ATPAF1-213ENST00000574428 A0A087WZY1 265 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 MAGEA13PA6NCF6 341 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 DLGAP1O14490 977 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 IL11P20809 199 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 GPR4P46093 362 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 OMPP47874 163 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 SLC25A53Q5H9E4 307 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 IGFL3Q6UXB1 125 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 RNF113BQ8IZP6 322 aaKnown RBP21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 RELTQ969Z4 430 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 ZBTB8AQ96BR9 441 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 TTTY12Q9BZ98 90 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 UBQLN3Q9H347 655 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 ZNF556Q9HAH1 456 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 PTPRQQ9UMZ3 2332 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 TMEM72A0PK05 275 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 SUSD5O60279 629 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 ZIC3O60481 467 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 SNAP29O95721 258 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 IFI30P13284 250 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 GDF1P27539 372 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 IFNGR2P38484 337 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 ZIK1Q3SY52 487 aaPredicted RBP21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 C1orf94Q6P1W5 598 aa21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 UBL7Q96S82 380 aaPredicted RBP21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 SMPD3Q9NY59 655 aaPredicted RBP21.76■■□□□ 1.07
ATPAF1-213ENST00000574428 NCKAP5O14513 1909 aa21.75■■□□□ 1.07
ATPAF1-213ENST00000574428 TRAV17A0A0B4J275 112 aa21.75■■□□□ 1.07
ATPAF1-213ENST00000574428 ADAP00813 363 aa21.75■■□□□ 1.07
ATPAF1-213ENST00000574428 LYNP07948 512 aa21.75■■□□□ 1.07
ATPAF1-213ENST00000574428 SRD5A2P31213 254 aa21.75■■□□□ 1.07
ATPAF1-213ENST00000574428 APOBEC1P41238 236 aaKnown RBP21.75■■□□□ 1.07
ATPAF1-213ENST00000574428 PLGLB1Q02325 96 aa21.75■■□□□ 1.07
ATPAF1-213ENST00000574428 EGR4Q05215 589 aa21.75■■□□□ 1.07
ATPAF1-213ENST00000574428 CRYZQ08257 329 aaKnown RBP21.75■■□□□ 1.07
ATPAF1-213ENST00000574428 ABHD17AQ96GS6 310 aa21.75■■□□□ 1.07
ATPAF1-213ENST00000574428 CRELD1Q96HD1 420 aa21.75■■□□□ 1.07
ATPAF1-213ENST00000574428 CNBD2Q96M20 576 aa21.75■■□□□ 1.07
ATPAF1-213ENST00000574428 TMEM43Q9BTV4 400 aa21.75■■□□□ 1.07
ATPAF1-213ENST00000574428 DGCR6LQ9BY27 220 aa21.75■■□□□ 1.07
ATPAF1-213ENST00000574428 ZNF703Q9H7S9 590 aaPredicted RBP21.75■■□□□ 1.07
ATPAF1-213ENST00000574428 PAPOLBQ9NRJ5 636 aaKnown RBP21.75■■□□□ 1.07
ATPAF1-213ENST00000574428 ZC3H12DA2A288 527 aaKnown RBP21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 ENO4A6NNW6 628 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 FAM166BA8MTA8 275 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 MAKP20794 623 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 ALDH6A1Q02252 535 aaKnown RBP21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 PRKCDQ05655 676 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 RAET1LQ5VY80 246 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 YRDCQ86U90 279 aaKnown RBP21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 ATP6V1C2Q8NEY4 427 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 BPIFA2Q96DR5 249 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 DNAJA3Q96EY1 480 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms