RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 DCTN5Q9BTE1 182 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 UCK2Q9BZX2 261 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 SLC25A51Q9H1U9 297 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 PORCNQ9H237 461 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 LHX5Q9H2C1 402 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 AAMDCQ9H7C9 122 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 GPN2Q9H9Y4 310 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 POPDC2Q9HBU9 364 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 FZD3Q9NPG1 666 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 PNRC2Q9NPJ4 139 aaKnown RBP4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 C12orf4Q9NQ89 552 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 GDF3Q9NR23 364 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 TPSG1Q9NRR2 321 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 ASIC5Q9NY37 505 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 MAT2BQ9NZL9 334 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 BFARQ9NZS9 450 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 FLRT3Q9NZU0 649 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 IL36AQ9UHA7 158 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 ZNF221Q9UK13 617 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 POMT2Q9UKY4 750 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 PADI3Q9ULW8 664 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 ICAM5Q9UMF0 924 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 PDE10AQ9Y233 779 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 ZNF337Q9Y3M9 751 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 CHST2Q9Y4C5 530 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 CPDO75976 1380 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 ANKRD30BQ9BXX2 1392 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 STK36Q9NRP7 1315 aa4.46□□□□□ -1.69
TOPBP1-210ENST00000572787 WDR27A2RRH5 827 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 PSMB11A5LHX3 300 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 FAM74A7A6NL05 159 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 VWC2LB2RUY7 222 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 RNASET2O00584 256 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 MSH4O15457 936 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 GSC2O15499 205 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 PAX4O43316 350 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 SGCEO43556 437 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 HYAL3O43820 417 aaPredicted RBP4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 TTLL1O95922 423 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 SYF2O95926 243 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 APOHP02749 345 aaPredicted RBP4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 MMP1P03956 469 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 KLK1P06870 262 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 COX5BP10606 129 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 NQO1P15559 274 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 ITGA2P17301 1181 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 NDUFB7P17568 137 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 IGFBP6P24592 240 aaPredicted RBP4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 MAP3K8P41279 467 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 SERPINB8P50452 374 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 PRELPP51888 382 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 UBE2KP61086 200 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 CX3CL1P78423 397 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 ZXDAP98168 799 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 MYL7Q01449 175 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 CKAP4Q07065 602 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 C2orf54Q08AI8 447 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 MTF1Q14872 753 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 PSG5Q15238 335 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 CDSNQ15517 529 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 INPP5JQ15735 1006 aaPredicted RBP4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 EZH2Q15910 746 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 FAM74A3Q4VXF1 159 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 TPRG1LQ5T0D9 272 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 METTL21CQ5VZV1 264 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 PLPP4Q5VZY2 271 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 ADNP2Q6IQ32 1131 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 APOBEC3HQ6NTF7 200 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 SPESP1Q6UW49 350 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 DHRS11Q6UWP2 260 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 CERS6Q6ZMG9 384 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 LANCL3Q6ZV70 420 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 COX15Q7KZN9 410 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 SHFQ7M4L6 423 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 RCOR2Q8IZ40 523 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 DCP1BQ8IZD4 617 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 HS3ST5Q8IZT8 346 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 SLC39A11Q8N1S5 342 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 ELMOD1Q8N336 334 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 TEX45Q8NA69 505 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 ACVR1CQ8NER5 493 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 OR2D3Q8NGH3 330 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 OR2L2Q8NH16 312 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 OR5AK3PQ8NH89 298 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 HMGCLL1Q8TB92 370 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 PLPPR1Q8TBJ4 325 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 TMEM163Q8TC26 289 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 SMAP2Q8WU79 429 aaPredicted RBP4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 AP3S1Q92572 193 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 HGDQ93099 445 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 UBE2E3Q969T4 207 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 PNPLA2Q96AD5 504 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 C18orf25Q96B23 403 aaPredicted RBP4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 C10orf90Q96M02 699 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 CCDC42Q96M95 316 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 WFIKKN1Q96NZ8 548 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 LGMNQ99538 433 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 MICU1Q9BPX6 476 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms