RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 MEIOBQ8N635 442 aa19.84■□□□□ 0.77
RAB40B-207ENST00000572603 AMBRA1Q9C0C7 1298 aa19.84■□□□□ 0.77
RAB40B-207ENST00000572603 TP63Q9H3D4 680 aaPredicted RBP19.84■□□□□ 0.77
RAB40B-207ENST00000572603 C12orf10Q9HB07 376 aa19.84■□□□□ 0.77
RAB40B-207ENST00000572603 V9GYQ6 96 aa19.84■□□□□ 0.77
RAB40B-207ENST00000572603 TENM4Q6N022 2769 aa19.84■□□□□ 0.77
RAB40B-207ENST00000572603 MED12LQ86YW9 2145 aa19.84■□□□□ 0.77
RAB40B-207ENST00000572603 USP9XQ93008 2570 aaPredicted RBP19.84■□□□□ 0.77
RAB40B-207ENST00000572603 ZC3H12DA2A288 527 aaKnown RBP19.83■□□□□ 0.77
RAB40B-207ENST00000572603 FIGNL2A6NMB9 653 aa19.83■□□□□ 0.77
RAB40B-207ENST00000572603 J3QKU1 62 aa19.83■□□□□ 0.77
RAB40B-207ENST00000572603 ADAMDEC1O15204 470 aa19.83■□□□□ 0.77
RAB40B-207ENST00000572603 TRAP1Q12931 704 aaKnown RBP19.83■□□□□ 0.77
RAB40B-207ENST00000572603 SYT14P1Q58G82 188 aa19.83■□□□□ 0.77
RAB40B-207ENST00000572603 MTX3Q5HYI7 312 aa19.83■□□□□ 0.77
RAB40B-207ENST00000572603 ZNF613Q6PF04 617 aa19.83■□□□□ 0.77
RAB40B-207ENST00000572603 DEF8Q6ZN54 512 aa19.83■□□□□ 0.77
RAB40B-207ENST00000572603 DHFR2Q86XF0 187 aa19.83■□□□□ 0.77
RAB40B-207ENST00000572603 ATP6V1C2Q8NEY4 427 aa19.83■□□□□ 0.77
RAB40B-207ENST00000572603 OR2V1Q8NHB1 315 aa19.83■□□□□ 0.77
RAB40B-207ENST00000572603 PRR7Q8TB68 274 aa19.83■□□□□ 0.77
RAB40B-207ENST00000572603 ZPLD1Q8TCW7 415 aa19.83■□□□□ 0.77
RAB40B-207ENST00000572603 SLC25A43Q8WUT9 341 aaPredicted RBP19.83■□□□□ 0.77
RAB40B-207ENST00000572603 UTP4Q969X6 686 aaKnown RBP19.83■□□□□ 0.77
RAB40B-207ENST00000572603 RELTQ969Z4 430 aa19.83■□□□□ 0.77
RAB40B-207ENST00000572603 MCUR1Q96AQ8 359 aa19.83■□□□□ 0.77
RAB40B-207ENST00000572603 DMRTA2Q96SC8 542 aa19.83■□□□□ 0.77
RAB40B-207ENST00000572603 OR11A1Q9GZK7 315 aa19.83■□□□□ 0.77
RAB40B-207ENST00000572603 TMEM27Q9HBJ8 222 aa19.83■□□□□ 0.77
RAB40B-207ENST00000572603 SERINC1Q9NRX5 453 aa19.83■□□□□ 0.77
RAB40B-207ENST00000572603 RPS6KB2Q9UBS0 482 aa19.83■□□□□ 0.77
RAB40B-207ENST00000572603 DIDO1Q9BTC0 2240 aaKnown RBP19.83■□□□□ 0.76
RAB40B-207ENST00000572603 PCNX1Q96RV3 2341 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 IGKV1D-42A0A075B6H8 117 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 AHRRA9YTQ3 701 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 EIF1AYO14602 144 aaKnown RBP19.82■□□□□ 0.76
RAB40B-207ENST00000572603 ZNF208O43345 1280 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 GABRA1P14867 456 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 CCNA2P20248 432 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 ACVR2AP27037 513 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 CDH12P55289 794 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 TMEM176BQ3YBM2 270 aaPredicted RBP19.82■□□□□ 0.76
RAB40B-207ENST00000572603 IQCCQ4KMZ1 466 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 ALG10BQ5I7T1 473 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 SWT1Q5T5J6 900 aaKnown RBP19.82■□□□□ 0.76
RAB40B-207ENST00000572603 C1orf185Q5T7R7 199 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 ULK3Q6PHR2 472 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 WDR88Q6ZMY6 472 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 ESPNLQ6ZVH7 1005 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 SEM1Q6ZVN7 128 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 MARVELD2Q8N4S9 558 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 OR10D3Q8NH80 312 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 ADAMTS16Q8TE57 1224 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 DNAJA4Q8WW22 397 aaPredicted RBP19.82■□□□□ 0.76
RAB40B-207ENST00000572603 PYURFQ96I23 114 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 ZNF845Q96IR2 970 aaPredicted RBP19.82■□□□□ 0.76
RAB40B-207ENST00000572603 C7orf34Q96L11 122 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 CLCF1Q9UBD9 225 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 A4GNTQ9UNA3 340 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 POMPQ9Y244 141 aa19.82■□□□□ 0.76
RAB40B-207ENST00000572603 SPIN1Q9Y657 262 aaPredicted RBP19.82■□□□□ 0.76
RAB40B-207ENST00000572603 GCN1Q92616 2671 aaKnown RBP19.81■□□□□ 0.76
RAB40B-207ENST00000572603 A0A1W2PNR3 127 aa19.81■□□□□ 0.76
RAB40B-207ENST00000572603 TRAPPC13A5PLN9 417 aa19.81■□□□□ 0.76
RAB40B-207ENST00000572603 CLCA1A8K7I4 914 aa19.81■□□□□ 0.76
RAB40B-207ENST00000572603 TNFSF11O14788 317 aa19.81■□□□□ 0.76
RAB40B-207ENST00000572603 CHP2O43745 196 aa19.81■□□□□ 0.76
RAB40B-207ENST00000572603 NPIPB7O75200 414 aa19.81■□□□□ 0.76
RAB40B-207ENST00000572603 PRSS23O95084 383 aa19.81■□□□□ 0.76
RAB40B-207ENST00000572603 IFNW1P05000 195 aa19.81■□□□□ 0.76
RAB40B-207ENST00000572603 PTGER4P35408 488 aa19.81■□□□□ 0.76
RAB40B-207ENST00000572603 VLDLRP98155 873 aa19.81■□□□□ 0.76
RAB40B-207ENST00000572603 PLXDC2Q6UX71 529 aa19.81■□□□□ 0.76
RAB40B-207ENST00000572603 NCCRP1Q6ZVX7 275 aaPredicted RBP19.81■□□□□ 0.76
RAB40B-207ENST00000572603 FKBP9P1Q75LS8 142 aa19.81■□□□□ 0.76
RAB40B-207ENST00000572603 SLC38A4Q969I6 547 aa19.81■□□□□ 0.76
RAB40B-207ENST00000572603 ARL5BQ96KC2 179 aa19.81■□□□□ 0.76
RAB40B-207ENST00000572603 PRRC1Q96M27 445 aa19.81■□□□□ 0.76
RAB40B-207ENST00000572603 UCN2Q96RP3 112 aa19.81■□□□□ 0.76
RAB40B-207ENST00000572603 SRXN1Q9BYN0 137 aa19.81■□□□□ 0.76
RAB40B-207ENST00000572603 POLR2J2Q9GZM3 115 aaKnown RBP19.81■□□□□ 0.76
RAB40B-207ENST00000572603 POLR2J3Q9H1A7 115 aaKnown RBP19.81■□□□□ 0.76
RAB40B-207ENST00000572603 ALKBH4Q9NXW9 302 aa19.81■□□□□ 0.76
RAB40B-207ENST00000572603 STOML1Q9UBI4 398 aa19.81■□□□□ 0.76
RAB40B-207ENST00000572603 MEMO1Q9Y316 297 aa19.81■□□□□ 0.76
RAB40B-207ENST00000572603 GJE1A6NN92 205 aa19.8■□□□□ 0.76
RAB40B-207ENST00000572603 E9PLN8 166 aa19.8■□□□□ 0.76
RAB40B-207ENST00000572603 J3KTA2 159 aa19.8■□□□□ 0.76
RAB40B-207ENST00000572603 FFAR1O14842 300 aa19.8■□□□□ 0.76
RAB40B-207ENST00000572603 OR5F1O95221 314 aa19.8■□□□□ 0.76
RAB40B-207ENST00000572603 FUT4P22083 530 aa19.8■□□□□ 0.76
RAB40B-207ENST00000572603 CXCR1P25024 350 aa19.8■□□□□ 0.76
RAB40B-207ENST00000572603 MAP2K6P52564 334 aa19.8■□□□□ 0.76
RAB40B-207ENST00000572603 EGR4Q05215 589 aa19.8■□□□□ 0.76
RAB40B-207ENST00000572603 PIN1Q13526 163 aaPredicted RBP19.8■□□□□ 0.76
RAB40B-207ENST00000572603 C4orf17Q53FE4 359 aa19.8■□□□□ 0.76
RAB40B-207ENST00000572603 RPTNQ6XPR3 784 aa19.8■□□□□ 0.76
RAB40B-207ENST00000572603 LINC00114Q6XXX2 140 aa19.8■□□□□ 0.76
RAB40B-207ENST00000572603 GDF7Q7Z4P5 450 aa19.8■□□□□ 0.76
RAB40B-207ENST00000572603 SLC47A1Q96FL8 570 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms