RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 OVOL3O00110 214 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 SNX3O60493 162 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 LDB3O75112 727 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 PDE5AO76074 875 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 KRT14P02533 472 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 HLA-DQB2P05538 268 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 NUDT17P0C025 328 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 SLC35G4P0C7Q5 338 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 DAOP14920 347 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 ITGA2P17301 1181 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 MAGP20916 626 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 CXCR2P25025 360 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 PEBP1P30086 187 aaKnown RBP4.77□□□□□ -1.65
SF3B3-214ENST00000572365 RBMXP38159 391 aaKnown RBP4.77□□□□□ -1.65
SF3B3-214ENST00000572365 CD81P60033 236 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 NCALDP61601 193 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 MAT1AQ00266 395 aaKnown RBP4.77□□□□□ -1.65
SF3B3-214ENST00000572365 DR1Q01658 176 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 LRRC63Q05C16 580 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 SLC34A1Q06495 639 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 PPIDQ08752 370 aaKnown RBP4.77□□□□□ -1.65
SF3B3-214ENST00000572365 ASPHQ12797 758 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 RCN2Q14257 317 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 SLC5A12Q1EHB4 618 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 KRT71Q3SY84 523 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 TMEM35AQ53FP2 167 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 ARMC4Q5T2S8 1044 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 SLC25A25Q6KCM7 469 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 FIGLAQ6QHK4 219 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 UNC5DQ6UXZ4 953 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 PACS1Q6VY07 963 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 IL17RELQ6ZVW7 336 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 NET1Q7Z628 596 aaPredicted RBP4.77□□□□□ -1.65
SF3B3-214ENST00000572365 MED12LQ86YW9 2145 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 HIPK1Q86Z02 1210 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 ZBED8Q8IZ13 594 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 BBS5Q8N3I7 341 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 ATPAF2Q8N5M1 289 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 OR5AR1Q8NGP9 310 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 OR52I2Q8NH67 350 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 FLVCR1-AS1Q8TAF5 88 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 RASSF5Q8WWW0 418 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 TLCD1Q96CP7 247 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 ZNF479Q96JC4 524 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 CCDC42Q96M95 316 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 ZNF317Q96PQ6 595 aaPredicted RBP4.77□□□□□ -1.65
SF3B3-214ENST00000572365 PIGQQ9BRB3 760 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 TTYH2Q9BSA4 534 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 LRRC1Q9BTT6 524 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 ZSCAN5AQ9BUG6 496 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 TDRD1Q9BXT4 1180 aaKnown RBP4.77□□□□□ -1.65
SF3B3-214ENST00000572365 SEMA6AQ9H2E6 1030 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 HSD3B7Q9H2F3 369 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 SLA2Q9H6Q3 261 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 WDR54Q9H977 334 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 UBTD1Q9HAC8 227 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 LRTM1Q9HBL6 345 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 MRM3Q9HC36 420 aaKnown RBP4.77□□□□□ -1.65
SF3B3-214ENST00000572365 HHATLQ9HCP6 504 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 GID8Q9NWU2 228 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 UBAP1Q9NZ09 502 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 STX18Q9P2W9 335 aaKnown RBP4.77□□□□□ -1.65
SF3B3-214ENST00000572365 UVRAGQ9P2Y5 699 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 TRPC4Q9UBN4 977 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 KCNS2Q9ULS6 477 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 PLCL2Q9UPR0 1127 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 CHMP2BQ9UQN3 213 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 VDAC3Q9Y277 283 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 UTP11Q9Y3A2 253 aaKnown RBP4.77□□□□□ -1.65
SF3B3-214ENST00000572365 OR2W1Q9Y3N9 320 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 FAM32AQ9Y421 112 aaKnown RBP4.77□□□□□ -1.65
SF3B3-214ENST00000572365 CMYA5Q8N3K9 4069 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 PRKDCP78527 4128 aaKnown RBP4.76□□□□□ -1.65
SF3B3-214ENST00000572365 A0A0J9YVX5 310 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 A0A1W2PPM1 405 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 SH3PXD2BA1X283 911 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 MACROD2A1Z1Q3 448 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 HYKKA2RU49 373 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 ASPDHA6ND91 283 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 MGAT4DA6NG13 374 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 TUBAL3A6NHL2 446 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 SIGLEC16A6NMB1 481 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 GABRR3A8MPY1 467 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 E9PBE3 544 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 TMEM178BH3BS89 294 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 RGS16O15492 202 aaPredicted RBP4.76□□□□□ -1.65
SF3B3-214ENST00000572365 CCDC22O60826 627 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 FKBP6O75344 327 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 SUPT3HO75486 399 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 ALPLP05186 524 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 NGFRP08138 427 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 DANCRP0C864 163 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 FAM106CPP0CH98 169 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 HLA-DOBP13765 273 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 M6PRP20645 277 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 CCNCP24863 283 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 PSMA2P25787 234 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 MIPP30301 263 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 GABRA5P31644 462 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 RPL5P46777 297 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms