RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 FAM159BA6NKW6 160 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 SYCE1LA8MT33 242 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 ARHGEF33A8MVX0 844 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 CTDSP2O14595 271 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 ZFAND5O76080 213 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 ERGP11308 486 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 PVRP15151 417 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 MAGP20916 626 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 CXCR2P25025 360 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 PTPN4P29074 926 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 BDKRB1P46663 353 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 SERPINB9P50453 376 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 CCR8P51685 355 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 RAB10P61026 200 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 RPS15AP62244 130 aaKnown RBP3.49□□□□□ -1.85
NUP88-202ENST00000570937 MRPS25P82663 173 aaKnown RBP3.49□□□□□ -1.85
NUP88-202ENST00000570937 CDKL1Q00532 357 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 EPS8Q12929 822 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 GRB7Q14451 532 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 FASTKD3Q14CZ7 662 aaKnown RBP3.49□□□□□ -1.85
NUP88-202ENST00000570937 PCLAFQ15004 111 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 TAF13Q15543 124 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 NDUFA9Q16795 377 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 FAM83EQ2M2I3 478 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 CTU2Q2VPK5 515 aaKnown RBP3.49□□□□□ -1.85
NUP88-202ENST00000570937 KBTBD12Q3ZCT8 623 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 CDKL4Q5MAI5 379 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 GARNL3Q5VVW2 1013 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 NIPAL1Q6NVV3 410 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 PRMT9Q6P2P2 845 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 FIGLAQ6QHK4 219 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 AGTRAPQ6RW13 159 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 SUSD1Q6UWL2 747 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 CYHR1Q6ZMK1 362 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 RAPH1Q70E73 1250 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 TRMT10CQ7L0Y3 403 aaKnown RBP3.49□□□□□ -1.85
NUP88-202ENST00000570937 ADAMTSL2Q86TH1 951 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 VASH2Q86V25 355 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 C17orf64Q86WR6 236 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 RAB43Q86YS6 212 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 EIF1ADQ8N9N8 165 aaKnown RBP3.49□□□□□ -1.85
NUP88-202ENST00000570937 LINC01555Q8NAE3 123 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 OR2AJ1Q8NGZ0 328 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 OR1L3Q8NH93 324 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 FLVCR1-AS1Q8TAF5 88 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 STAG3L4Q8TBR4 150 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 MRGPRDQ8TDS7 321 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 APOBEC4Q8WW27 367 aaKnown RBP3.49□□□□□ -1.85
NUP88-202ENST00000570937 HPSE2Q8WWQ2 592 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 STARD8Q92502 1023 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 PTERQ96BW5 349 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 MED8Q96G25 268 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 POM121L2Q96KW2 1035 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 LINC00479Q96M42 142 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 TSNARE1Q96NA8 513 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 IP6K3Q96PC2 410 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 FMO2Q99518 471 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 RBBP8Q99708 897 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 EGFL8Q99944 293 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 LMF2Q9BU23 707 aaKnown RBP3.49□□□□□ -1.85
NUP88-202ENST00000570937 TRAF4Q9BUZ4 470 aaPredicted RBP3.49□□□□□ -1.85
NUP88-202ENST00000570937 ACAT2Q9BWD1 397 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 TEX12Q9BXU0 123 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 DERL2Q9GZP9 239 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 LAT2Q9GZY6 243 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 ADNPQ9H2P0 1102 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 DPAGT1Q9H3H5 408 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 NMRAL1Q9HBL8 299 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 FAM60AQ9NP50 221 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 GALPQ9UBC7 116 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 CIDEBQ9UHD4 219 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 TAC3Q9UHF0 121 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 NXT1Q9UKK6 140 aaKnown RBP3.49□□□□□ -1.85
NUP88-202ENST00000570937 RUVBL2Q9Y230 463 aaKnown RBP3.49□□□□□ -1.85
NUP88-202ENST00000570937 PDE10AQ9Y233 779 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 FARSAQ9Y285 508 aaKnown RBP3.49□□□□□ -1.85
NUP88-202ENST00000570937 MRPS28Q9Y2Q9 187 aaKnown RBP3.49□□□□□ -1.85
NUP88-202ENST00000570937 ACOT9Q9Y305 439 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 MMP24Q9Y5R2 645 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 NBEAQ8NFP9 2946 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 URB1O60287 2271 aaKnown RBP3.49□□□□□ -1.85
NUP88-202ENST00000570937 DSPP15924 2871 aaKnown RBP3.49□□□□□ -1.85
NUP88-202ENST00000570937 TPRP12270 2363 aaKnown RBP3.48□□□□□ -1.85
NUP88-202ENST00000570937 A0A087WW49 117 aa3.48□□□□□ -1.85
NUP88-202ENST00000570937 LOC102723996A0A087X1L8 192 aa3.48□□□□□ -1.85
NUP88-202ENST00000570937 A0A0J9YVX5 310 aa3.48□□□□□ -1.85
NUP88-202ENST00000570937 URADA6NGE7 173 aa3.48□□□□□ -1.85
NUP88-202ENST00000570937 MKRN2OSH3BPM6 223 aa3.48□□□□□ -1.85
NUP88-202ENST00000570937 ADAMDEC1O15204 470 aa3.48□□□□□ -1.85
NUP88-202ENST00000570937 XRCC3O43542 346 aa3.48□□□□□ -1.85
NUP88-202ENST00000570937 OR10H2O60403 315 aa3.48□□□□□ -1.85
NUP88-202ENST00000570937 TRMUO75648 421 aaKnown RBP3.48□□□□□ -1.85
NUP88-202ENST00000570937 TSPAN9O75954 239 aa3.48□□□□□ -1.85
NUP88-202ENST00000570937 ACSL3O95573 720 aa3.48□□□□□ -1.85
NUP88-202ENST00000570937 GUCA1CO95843 209 aa3.48□□□□□ -1.85
NUP88-202ENST00000570937 WDPCPO95876 746 aa3.48□□□□□ -1.85
NUP88-202ENST00000570937 RAF1P04049 648 aa3.48□□□□□ -1.85
NUP88-202ENST00000570937 SLC35G6P0C7Q6 338 aa3.48□□□□□ -1.85
NUP88-202ENST00000570937 CCDC166P0CW27 439 aa3.48□□□□□ -1.85
NUP88-202ENST00000570937 PRKAR1AP10644 381 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms