RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 OR7D2Q96RA2 312 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 SDF2Q99470 211 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 ROPN1BQ9BZX4 212 aaPredicted RBP16.67■□□□□ 0.26
SCARF1-204ENST00000570902 CHODLQ9H9P2 273 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 ROPN1Q9HAT0 212 aaPredicted RBP16.67■□□□□ 0.26
SCARF1-204ENST00000570902 ACER3Q9NUN7 267 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 LGALS13Q9UHV8 139 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 MID2Q9UJV3 735 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 DNAJC15Q9Y5T4 150 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 FKBP7Q9Y680 259 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 LOC100289279A0A1B0GTE1 492 aa16.66■□□□□ 0.26
SCARF1-204ENST00000570902 DUXAA6NLW8 204 aa16.66■□□□□ 0.26
SCARF1-204ENST00000570902 ZNF716A6NP11 495 aa16.66■□□□□ 0.26
SCARF1-204ENST00000570902 DNPH1O43598 174 aa16.66■□□□□ 0.26
SCARF1-204ENST00000570902 AK1P00568 194 aa16.66■□□□□ 0.26
SCARF1-204ENST00000570902 TFPIP10646 304 aa16.66■□□□□ 0.26
SCARF1-204ENST00000570902 FKBP2P26885 142 aaKnown RBP16.66■□□□□ 0.26
SCARF1-204ENST00000570902 APOBEC1P41238 236 aaKnown RBP16.66■□□□□ 0.26
SCARF1-204ENST00000570902 PDLIM4P50479 330 aa16.66■□□□□ 0.26
SCARF1-204ENST00000570902 PCLAFQ15004 111 aa16.66■□□□□ 0.26
SCARF1-204ENST00000570902 ZNF141Q15928 474 aa16.66■□□□□ 0.26
SCARF1-204ENST00000570902 LIPNQ5VXI9 398 aa16.66■□□□□ 0.26
SCARF1-204ENST00000570902 C17orf78Q8N4C9 275 aa16.66■□□□□ 0.26
SCARF1-204ENST00000570902 PRPF18Q99633 342 aaKnown RBP16.66■□□□□ 0.26
SCARF1-204ENST00000570902 PIMREGQ9BSJ6 248 aa16.66■□□□□ 0.26
SCARF1-204ENST00000570902 ANKRD28O15084 1053 aa16.65■□□□□ 0.26
SCARF1-204ENST00000570902 LYPLA1O75608 230 aaPredicted RBP16.65■□□□□ 0.26
SCARF1-204ENST00000570902 PMS2P2O95744 297 aa16.65■□□□□ 0.26
SCARF1-204ENST00000570902 C6orf47O95873 294 aa16.65■□□□□ 0.26
SCARF1-204ENST00000570902 CSTAP01040 98 aa16.65■□□□□ 0.26
SCARF1-204ENST00000570902 ITGA5P08648 1049 aa16.65■□□□□ 0.26
SCARF1-204ENST00000570902 UBTFL6P0CB48 400 aaPredicted RBP16.65■□□□□ 0.26
SCARF1-204ENST00000570902 SLC16A1P53985 500 aa16.65■□□□□ 0.26
SCARF1-204ENST00000570902 PHC1P78364 1004 aa16.65■□□□□ 0.26
SCARF1-204ENST00000570902 GGTLC2Q14390 218 aa16.65■□□□□ 0.26
SCARF1-204ENST00000570902 SQLEQ14534 574 aa16.65■□□□□ 0.26
SCARF1-204ENST00000570902 GPR68Q15743 365 aa16.65■□□□□ 0.26
SCARF1-204ENST00000570902 EIF3MQ7L2H7 374 aaKnown RBP16.65■□□□□ 0.26
SCARF1-204ENST00000570902 C1orf162Q8NEQ5 155 aaPredicted RBP16.65■□□□□ 0.26
SCARF1-204ENST00000570902 OR5D16Q8NGK9 328 aa16.65■□□□□ 0.26
SCARF1-204ENST00000570902 PPP3R2Q96LZ3 170 aa16.65■□□□□ 0.26
SCARF1-204ENST00000570902 GATA5Q9BWX5 397 aaPredicted RBP16.65■□□□□ 0.26
SCARF1-204ENST00000570902 C1QTNF6Q9BXI9 259 aa16.65■□□□□ 0.26
SCARF1-204ENST00000570902 MKS1Q9NXB0 559 aa16.65■□□□□ 0.26
SCARF1-204ENST00000570902 SLC17A7Q9P2U7 560 aa16.65■□□□□ 0.26
SCARF1-204ENST00000570902 DCTN4Q9UJW0 460 aa16.65■□□□□ 0.26
SCARF1-204ENST00000570902 AMDHD2Q9Y303 409 aa16.65■□□□□ 0.26
SCARF1-204ENST00000570902 HDGFL3Q9Y3E1 203 aa16.65■□□□□ 0.26
SCARF1-204ENST00000570902 TRAF6Q9Y4K3 522 aa16.65■□□□□ 0.26
SCARF1-204ENST00000570902 VWC2LB2RUY7 222 aa16.64■□□□□ 0.25
SCARF1-204ENST00000570902 CFLARO15519 480 aa16.64■□□□□ 0.25
SCARF1-204ENST00000570902 TRIM13O60858 407 aa16.64■□□□□ 0.25
SCARF1-204ENST00000570902 STX11O75558 287 aa16.64■□□□□ 0.25
SCARF1-204ENST00000570902 NR4A2P43354 598 aa16.64■□□□□ 0.25
SCARF1-204ENST00000570902 MAGEA8P43361 318 aa16.64■□□□□ 0.25
SCARF1-204ENST00000570902 TGFBR3Q03167 851 aa16.64■□□□□ 0.25
SCARF1-204ENST00000570902 KRT71Q3SY84 523 aa16.64■□□□□ 0.25
SCARF1-204ENST00000570902 IL17RELQ6ZVW7 336 aa16.64■□□□□ 0.25
SCARF1-204ENST00000570902 WDR31Q8NA23 367 aa16.64■□□□□ 0.25
SCARF1-204ENST00000570902 TCP10LQ8TDR4 215 aa16.64■□□□□ 0.25
SCARF1-204ENST00000570902 TWIST2Q8WVJ9 160 aa16.64■□□□□ 0.25
SCARF1-204ENST00000570902 ZBTB9Q96C00 473 aa16.64■□□□□ 0.25
SCARF1-204ENST00000570902 MSI2Q96DH6 328 aaKnown RBP16.64■□□□□ 0.25
SCARF1-204ENST00000570902 MECRQ9BV79 373 aa16.64■□□□□ 0.25
SCARF1-204ENST00000570902 TMEM109Q9BVC6 243 aa16.64■□□□□ 0.25
SCARF1-204ENST00000570902 MYOZ1Q9NP98 299 aaPredicted RBP16.64■□□□□ 0.25
SCARF1-204ENST00000570902 UPB1Q9UBR1 384 aa16.64■□□□□ 0.25
SCARF1-204ENST00000570902 CHRNA9Q9UGM1 479 aa16.64■□□□□ 0.25
SCARF1-204ENST00000570902 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.63■□□□□ 0.253e-6■□□□□ 10.1
SCARF1-204ENST00000570902 SLC35F4A4IF30 521 aa16.63■□□□□ 0.25
SCARF1-204ENST00000570902 PDLIM1O00151 329 aa16.63■□□□□ 0.25
SCARF1-204ENST00000570902 LY6HO94772 140 aa16.63■□□□□ 0.25
SCARF1-204ENST00000570902 FGF4P08620 206 aa16.63■□□□□ 0.25
SCARF1-204ENST00000570902 APEHP13798 732 aaKnown RBP16.63■□□□□ 0.25
SCARF1-204ENST00000570902 CREB1P16220 341 aa16.63■□□□□ 0.25
SCARF1-204ENST00000570902 ALDH3A1P30838 453 aa16.63■□□□□ 0.25
SCARF1-204ENST00000570902 CLK1P49759 484 aaKnown RBP16.63■□□□□ 0.25
SCARF1-204ENST00000570902 SRSF2Q01130 221 aaKnown RBP16.63■□□□□ 0.25
SCARF1-204ENST00000570902 PTGR1Q14914 329 aa16.63■□□□□ 0.25
SCARF1-204ENST00000570902 OR5AK3PQ8NH89 298 aa16.63■□□□□ 0.25
SCARF1-204ENST00000570902 ZNF563Q8TA94 476 aa16.63■□□□□ 0.25
SCARF1-204ENST00000570902 OIT3Q8WWZ8 545 aa16.63■□□□□ 0.25
SCARF1-204ENST00000570902 COQ8BQ96D53 544 aa16.63■□□□□ 0.25
SCARF1-204ENST00000570902 CCDC106Q9BWC9 280 aa16.63■□□□□ 0.25
SCARF1-204ENST00000570902 BHLHE41Q9C0J9 482 aaPredicted RBP16.63■□□□□ 0.25
SCARF1-204ENST00000570902 SLC17A5Q9NRA2 495 aa16.63■□□□□ 0.25
SCARF1-204ENST00000570902 PARPBPQ9NWS1 579 aa16.63■□□□□ 0.25
SCARF1-204ENST00000570902 LOC390937A0A1W2PQ73 354 aa16.62■□□□□ 0.25
SCARF1-204ENST00000570902 PIP5K1BO14986 540 aa16.62■□□□□ 0.25
SCARF1-204ENST00000570902 FCMRO60667 390 aa16.62■□□□□ 0.25
SCARF1-204ENST00000570902 UGT2B17O75795 530 aa16.62■□□□□ 0.25
SCARF1-204ENST00000570902 PGRP06401 933 aa16.62■□□□□ 0.25
SCARF1-204ENST00000570902 MATN1P21941 496 aa16.62■□□□□ 0.25
SCARF1-204ENST00000570902 NTF4P34130 210 aa16.62■□□□□ 0.25
SCARF1-204ENST00000570902 SOAT1P35610 550 aa16.62■□□□□ 0.25
SCARF1-204ENST00000570902 SNRPD2P62316 118 aaKnown RBP16.62■□□□□ 0.25
SCARF1-204ENST00000570902 ARHGAP11BQ3KRB8 267 aa16.62■□□□□ 0.25
SCARF1-204ENST00000570902 ATP6AP1LQ52LC2 224 aa16.62■□□□□ 0.25
SCARF1-204ENST00000570902 CASP12Q6UXS9 341 aa16.62■□□□□ 0.25
SCARF1-204ENST00000570902 GRINAQ7Z429 371 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms