RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 OSBPL1AQ9BXW6 950 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 GSDMCQ9BYG8 508 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 NRSN2Q9GZP1 204 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 MFSD1Q9H3U5 465 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 Q9H521 79 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 ZDHHC6Q9H6R6 413 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 CALHM2Q9HA72 323 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 CPNE5Q9HCH3 593 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 TNFRSF12AQ9NP84 129 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 SPHK2Q9NRA0 654 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 LANCL2Q9NS86 450 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 NLE1Q9NVX2 485 aaPredicted RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 DUS2Q9NX74 493 aaKnown RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 CCDC59Q9P031 241 aaKnown RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 CD84Q9UIB8 345 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 PITPNC1Q9UKF7 332 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 NUP50Q9UKX7 468 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 DIMT1Q9UNQ2 313 aaKnown RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 USP22Q9UPT9 525 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 SLC5A6Q9Y289 635 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 DHRS7Q9Y394 339 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 DYRK1BQ9Y463 629 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 L3MBTL1Q9Y468 752 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 TBL2Q9Y4P3 447 aaKnown RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 PRSS21Q9Y6M0 314 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 SPAG17Q6Q759 2223 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 TBC1D3DA0A087WVF3 549 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 ELOA3CA0A087WX78 387 aaPredicted RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 TBC1D3IA0A087WXS9 549 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 TBC1D3EA0A087X179 549 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 A0A087X1B8 175 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 TBC1D3KA0A087X1G2 549 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 A0A0G2JND7 137 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 TRBV11-1A0A0K0K1C0 115 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 GXYLT2A0PJZ3 443 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 C7orf72A4D263 438 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 METTL21EPA6NDL7 271 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 TBC1D3BA6NDS4 549 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 TBC1D3FA6NER0 549 aaPredicted RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 A6NIZ1 184 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 CGB1A6NKQ9 187 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 ELOA3DA6NLF2 546 aaPredicted RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 DUXAA6NLW8 204 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 FAM90A27PA6NNH2 459 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 HEPACAM2A8MVW5 462 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 PRR33A8MZF0 331 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 TBC1D3LB9A6J9 549 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 MCIDASD6RGH6 385 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 SMLR1H3BR10 107 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 P2RY10O00398 339 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 ZNF195O14628 629 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 GOSR2O14653 212 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 RAB29O14966 203 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 SLC22A2O15244 555 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 SLC31A2O15432 143 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 GSC2O15499 205 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 SLC28A2O43868 658 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 DPM1O60762 260 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 CTNSO60931 367 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 RBMXL2O75526 392 aaKnown RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 ITGA10O75578 1167 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 TM7SF2O76062 418 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 VAMP5O95183 116 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 PAPSS2O95340 614 aaPredicted RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 CBX6O95503 412 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 TSPAN12O95859 305 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 IGSF6O95976 241 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 EPOP01588 193 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 JUNP05412 331 aaKnown RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 PROS1P07225 676 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 GUSBP08236 651 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 TBC1D3HP0C7X1 549 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 MYL2P10916 166 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 ADH5P11766 374 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 ICAM2P13598 275 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 GM2AP17900 193 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 TSPAN8P19075 237 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 OGNP20774 298 aaKnown RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 FPR1P21462 350 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 BMP5P22003 454 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 LHCGRP22888 699 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 DDX6P26196 483 aaKnown RBP eCLIP3.27□□□□□ -1.89
SMG6-208ENST00000570874 PPP2R1BP30154 601 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 CDAP32320 146 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 NTF4P34130 210 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 THBS4P35443 961 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 MMP12P39900 470 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 OPRD1P41143 372 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 MAP3K8P41279 467 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 PTGFRP43088 359 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 CTSKP43235 329 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 KIR2DL1P43626 348 aaPredicted RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 MTNR1AP48039 350 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 NPBWR2P48146 333 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 MRPL19P49406 292 aaKnown RBP3.27□□□□□ -1.89
SMG6-208ENST00000570874 TPMTP51580 245 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 PGDP52209 483 aa3.27□□□□□ -1.89
SMG6-208ENST00000570874 STC1P52823 247 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms