RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 GLOD5A6NK44 160 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 F5H5P2 479 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 H7BY64 318 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 H7C2Y5 167 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 OR1F1O43749 312 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 CBX7O95931 251 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 PTGER1P34995 402 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 ACTA2P62736 377 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 ACTG2P63267 376 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 SLC7A9P82251 487 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 IL10RAQ13651 578 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 CDK5R1Q15078 307 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 FBXO46Q6PJ61 603 aaPredicted RBP14.26□□□□□ -0.13
SMG6-207ENST00000570756 CCDC116Q8IYX3 515 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 AMER3Q8N944 861 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 DNAAF1Q8NEP3 725 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 OR5AR1Q8NGP9 310 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 OR6K3Q8NGY3 331 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 GCDHQ92947 438 aaPredicted RBP14.26□□□□□ -0.13
SMG6-207ENST00000570756 LINC00615Q96LM1 132 aaPredicted RBP14.26□□□□□ -0.13
SMG6-207ENST00000570756 PRAP1Q96NZ9 151 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 DERL3Q96Q80 235 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 NKX6-2Q9C056 277 aaPredicted RBP14.26□□□□□ -0.13
SMG6-207ENST00000570756 IL21Q9HBE4 155 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 EQTNQ9NQ60 294 aa14.26□□□□□ -0.13
SMG6-207ENST00000570756 PURGQ9UJV8 347 aaKnown RBP14.26□□□□□ -0.13
SMG6-207ENST00000570756 ACOT7O00154 380 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 POP7O75817 140 aaKnown RBP14.25□□□□□ -0.13
SMG6-207ENST00000570756 ZNF3P17036 446 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 FAUP35544 74 aaKnown RBP14.25□□□□□ -0.13
SMG6-207ENST00000570756 HSD17B2P37059 387 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 CD96P40200 585 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 FXYD6P3P58550 94 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 MAT1AQ00266 395 aaKnown RBP14.25□□□□□ -0.13
SMG6-207ENST00000570756 LGALS3BPQ08380 585 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 SLC9A5Q14940 896 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 TMEM69Q5SWH9 247 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 RNF113BQ8IZP6 322 aaKnown RBP14.25□□□□□ -0.13
SMG6-207ENST00000570756 HDDC3Q8N4P3 179 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 NUP43Q8NFH3 380 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 OR2L2Q8NH16 312 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 HMGB4Q8WW32 186 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 ASB13Q8WXK3 278 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 ORAI1Q96D31 301 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 MRI1Q9BV20 369 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 EXOSC3Q9NQT5 275 aaKnown RBP14.25□□□□□ -0.13
SMG6-207ENST00000570756 NDRG3Q9UGV2 375 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 SLC6A5Q9Y345 797 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 KIAA1549LQ6ZVL6 1849 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 OBSL1O75147 1896 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 SIX6O95475 246 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 PTNP21246 168 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 MC2RQ01718 297 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 ZNF805Q5CZA5 627 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 HEPHL1Q6MZM0 1159 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 RANBP3LQ86VV4 465 aaPredicted RBP14.25□□□□□ -0.13
SMG6-207ENST00000570756 CDK20Q8IZL9 346 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 CAMKVQ8NCB2 501 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 OR4C6Q8NH72 309 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 C1orf216Q8TAB5 229 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 OR14A2Q96R54 314 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 POLMQ9NP87 494 aaPredicted RBP14.25□□□□□ -0.13
SMG6-207ENST00000570756 ZNF443Q9Y2A4 671 aaPredicted RBP14.25□□□□□ -0.13
SMG6-207ENST00000570756 KCNK7Q9Y2U2 307 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 INSL5Q9Y5Q6 135 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 COL4A3Q01955 1670 aa14.25□□□□□ -0.13
SMG6-207ENST00000570756 CEP290O15078 2479 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 IFITM5A6NNB3 132 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 CLEC3AO75596 197 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 SPDEFO95238 335 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 EFEMP2O95967 443 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 CD1AP06126 327 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 RAB40ALP0C0E4 278 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 RPA2P15927 270 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 GABRR2P28476 465 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 ILF3Q12906 894 aaKnown RBP eCLIP14.24□□□□□ -0.137e-10■■■□□ 16.1
SMG6-207ENST00000570756 ASTLQ6HA08 431 aaPredicted RBP14.24□□□□□ -0.13
SMG6-207ENST00000570756 RNF180Q86T96 592 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 SYS1Q8N2H4 156 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 SMAP2Q8WU79 429 aaPredicted RBP14.24□□□□□ -0.13
SMG6-207ENST00000570756 RAB40AQ8WXH6 277 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 SLC25A38Q96DW6 304 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 WDR89Q96FK6 387 aaPredicted RBP14.24□□□□□ -0.13
SMG6-207ENST00000570756 DTD2Q96FN9 168 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 DMRTA2Q96SC8 542 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 VN1R3Q9BXE9 311 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 TRAPPC13A5PLN9 417 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 FAM74A7A6NL05 159 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 PRKRAO75569 313 aaKnown RBP14.24□□□□□ -0.13
SMG6-207ENST00000570756 RPN2P04844 631 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 UBBP0CG47 229 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 UBCP0CG48 685 aaKnown RBP14.24□□□□□ -0.13
SMG6-207ENST00000570756 ERGP11308 486 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 ZNF35P13682 527 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 SRMP19623 302 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 CSNK2A2P19784 350 aaPredicted RBP14.24□□□□□ -0.13
SMG6-207ENST00000570756 SLC2A5P22732 501 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 PTH2RP49190 550 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 P2RX1P51575 399 aa14.24□□□□□ -0.13
SMG6-207ENST00000570756 AKR1D1P51857 326 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms