RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 LIME1Q9H400 295 aa13.58□□□□□ -0.24
RAB40B-203ENST00000570676 CACYBPQ9HB71 228 aaKnown RBP13.58□□□□□ -0.24
RAB40B-203ENST00000570676 GPC6Q9Y625 555 aaPredicted RBP13.58□□□□□ -0.24
RAB40B-203ENST00000570676 HRNRQ86YZ3 2850 aaPredicted RBP13.57□□□□□ -0.24
RAB40B-203ENST00000570676 GMFGO60234 142 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 SERPINB7O75635 380 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 SERPINA1P01009 418 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 IFNA14P01570 189 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 OPN1SWP03999 348 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 CRHP06850 196 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 EPXP11678 715 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 ZNF17P17021 662 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 TBXA2RP21731 343 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 LCN1P31025 176 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 IST1P53990 364 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 CD226Q15762 336 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 CYBRD1Q53TN4 286 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 AP1ARQ63HQ0 302 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 VWA1Q6PCB0 445 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 GGNQ86UU5 652 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 CDC20BQ86Y33 519 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 ARMC8Q8IUR7 673 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 GATSQ8NAP1 163 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 BHLHE22Q8NFJ8 381 aaPredicted RBP13.57□□□□□ -0.24
RAB40B-203ENST00000570676 OR52P1PQ8NH57 321 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 SLC26A7Q8TE54 656 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 WDR60Q8WVS4 1066 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 NINJ1Q92982 152 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 TAMM41Q96BW9 452 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 ZG16BQ96DA0 208 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 ZNF845Q96IR2 970 aaPredicted RBP13.57□□□□□ -0.24
RAB40B-203ENST00000570676 NPAS1Q99742 590 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 SPATA5L1Q9BVQ7 753 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 PINK1Q9BXM7 581 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 HOXD1Q9GZZ0 328 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 UBQLN4Q9NRR5 601 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 VDAC3Q9Y277 283 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 AKAP6Q13023 2319 aa13.57□□□□□ -0.24
RAB40B-203ENST00000570676 CENPVL1A0A0U1RR11 272 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 A0A1W2PQD3 144 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 AGAP5A6NIR3 686 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 A8MXE2 369 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 NPIPB9F8W1W9 429 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 NDUFB5O43674 189 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 UGT2B17O75795 530 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 MFN2O95140 757 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 ZNF682O95780 498 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 DBIP07108 87 aaKnown RBP13.56□□□□□ -0.24
RAB40B-203ENST00000570676 PSMA4P25789 261 aaKnown RBP13.56□□□□□ -0.24
RAB40B-203ENST00000570676 ERFP50548 548 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 ART1P52961 327 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 CRYBA2P53672 197 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 ATP12AP54707 1039 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 DMTNQ08495 405 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 GUSBP1Q15486 140 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 ZNF141Q15928 474 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 MAPK14Q16539 360 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 MTX3Q5HYI7 312 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 OR2A2Q6IF42 318 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 P4HA3Q7Z4N8 544 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 SPATA24Q86W54 205 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 ZNF614Q8N883 585 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 ZNF527Q8NB42 609 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 OR52E4Q8NGH9 312 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 SMPDL3BQ92485 455 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 STARD4Q96DR4 205 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 RNF122Q9H9V4 155 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 DCAF13Q9NV06 445 aaKnown RBP13.56□□□□□ -0.24
RAB40B-203ENST00000570676 ADPRHL2Q9NX46 363 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 ST6GALNAC2Q9UJ37 374 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 KCNE5Q9UJ90 142 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 RPS6KA6Q9UK32 745 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 ZNF232Q9UNY5 417 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 IFT52Q9Y366 437 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 ZNF175Q9Y473 711 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 AP4B1Q9Y6B7 739 aa13.56□□□□□ -0.24
RAB40B-203ENST00000570676 HIVEP1P15822 2718 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 C7orf72A4D263 438 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 AQP12BA6NM10 295 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 SCDO00767 359 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 MSTNO14793 375 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 PABPC4LP0CB38 370 aaKnown RBP13.55□□□□□ -0.24
RAB40B-203ENST00000570676 HPGDP15428 266 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 IL7RP16871 459 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 RPS4Y1P22090 263 aaKnown RBP13.55□□□□□ -0.24
RAB40B-203ENST00000570676 CCKARP32238 428 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 KIR2DL2P43627 348 aaPredicted RBP13.55□□□□□ -0.24
RAB40B-203ENST00000570676 RNF144AP50876 292 aaPredicted RBP13.55□□□□□ -0.24
RAB40B-203ENST00000570676 EEF1A1P68104 462 aaKnown RBP13.55□□□□□ -0.24
RAB40B-203ENST00000570676 KPNB1Q14974 876 aaKnown RBP13.55□□□□□ -0.24
RAB40B-203ENST00000570676 LARS2Q15031 903 aaKnown RBP13.55□□□□□ -0.24
RAB40B-203ENST00000570676 PON3Q15166 354 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 CTU2Q2VPK5 515 aaKnown RBP13.55□□□□□ -0.24
RAB40B-203ENST00000570676 PLPPR5Q32ZL2 321 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 ZNF311Q5JNZ3 666 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 PDZK1Q5T2W1 519 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 EEF1A1P5Q5VTE0 462 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 CBLL1Q75N03 491 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 EIF3MQ7L2H7 374 aaKnown RBP13.55□□□□□ -0.24
RAB40B-203ENST00000570676 CHMP1BQ7LBR1 199 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms