RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 P3H2Q8IVL5 708 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 PQLC1Q8N2U9 271 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 SLC7A13Q8TCU3 470 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 MPP4Q96JB8 637 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 BDH2Q9BUT1 245 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 LDAHQ9H6V9 325 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 TMEM185BQ9H7F4 350 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 DCLRE1BQ9H816 532 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 C12orf10Q9HB07 376 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 CHRNA9Q9UGM1 479 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 NPIPA1Q9UND3 350 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 ZNF337Q9Y3M9 751 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 TMEM72A0PK05 275 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 MGRN1O60291 552 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 E2F6O75461 281 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 OPN1LWP04000 364 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 ANPEPP15144 967 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 EXOC3L2Q2M3D2 409 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 PODNL1Q6PEZ8 512 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 LINC00114Q6XXX2 140 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 SIAH3Q8IW03 269 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 ALPK1Q96QP1 1244 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 ANKRD19PQ9H560 264 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 SERINC1Q9NRX5 453 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 MED12Q93074 2177 aa11.14□□□□□ -0.63
NUP93-220ENST00000569842 H3BML4 177 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 HMGA2P52926 109 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 GFRA1P56159 465 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 LSM11P83369 360 aaKnown RBP eCLIP11.13□□□□□ -0.63
NUP93-220ENST00000569842 LAPTM4AQ15012 233 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 SEC23BQ15437 767 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 DCST1Q5T197 706 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 TBPL2Q6SJ96 375 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 TMEM179BQ7Z7N9 219 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 OR4C15Q8NGM1 316 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 CENPNQ96H22 339 aaPredicted RBP11.13□□□□□ -0.63
NUP93-220ENST00000569842 EXO5Q9H790 373 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 SPENQ96T58 3664 aaKnown RBP11.13□□□□□ -0.63
NUP93-220ENST00000569842 A0A087WUU8 490 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 TRGV5A0A0B4J1U4 118 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 ELK4P28324 431 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 LIMS1P48059 325 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 SELENBP1Q13228 472 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 TTC33Q6PID6 262 aaPredicted RBP11.13□□□□□ -0.63
NUP93-220ENST00000569842 ZNF730Q6ZMV8 503 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 TMEM239Q8WW34 195 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 SMPDL3BQ92485 455 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 EPYCQ99645 322 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 FUZQ9BT04 418 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 ZNF426Q9BUY5 554 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 OR11A1Q9GZK7 315 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 NKX1-2Q9UD57 310 aaPredicted RBP11.13□□□□□ -0.63
NUP93-220ENST00000569842 TMCC3Q9ULS5 477 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 FREM3P0C091 2139 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 IGKV1D-42A0A075B6H8 117 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 ZC3H12DA2A288 527 aaKnown RBP11.13□□□□□ -0.63
NUP93-220ENST00000569842 KPNA4O00629 521 aaPredicted RBP11.13□□□□□ -0.63
NUP93-220ENST00000569842 DNAJA1P31689 397 aaKnown RBP11.13□□□□□ -0.63
NUP93-220ENST00000569842 STARP49675 285 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 UGT2B15P54855 530 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.13□□□□□ -0.63
NUP93-220ENST00000569842 PRR30Q53SZ7 412 aaPredicted RBP11.13□□□□□ -0.63
NUP93-220ENST00000569842 C3orf33Q6P1S2 294 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 TRILQ7L0X0 811 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 ICA1LQ8NDH6 482 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 NEIL3Q8TAT5 605 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 ACOT11Q8WXI4 607 aaPredicted RBP11.13□□□□□ -0.63
NUP93-220ENST00000569842 SNRNP40Q96DI7 357 aaKnown RBP11.13□□□□□ -0.63
NUP93-220ENST00000569842 DNAJA3Q96EY1 480 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 HS6ST2Q96MM7 605 aa11.13□□□□□ -0.63
NUP93-220ENST00000569842 BARD1Q99728 777 aaKnown RBP11.13□□□□□ -0.63
NUP93-220ENST00000569842 SH3PXD2BA1X283 911 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 IGHG3P01860 377 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 TFPIP10646 304 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 CHMP24386 653 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 SHC1P29353 583 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 SFTPDP35247 375 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 GCKP35557 465 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 RBM34P42696 430 aaKnown RBP11.12□□□□□ -0.63
NUP93-220ENST00000569842 EGR4Q05215 589 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 RIPK1Q13546 671 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 RRM2BQ7LG56 351 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 HS3ST5Q8IZT8 346 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 PFN4Q8NHR9 129 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 RNPEPL1Q9HAU8 725 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 C6orf203Q9P0P8 240 aaPredicted RBP11.12□□□□□ -0.63
NUP93-220ENST00000569842 STX18Q9P2W9 335 aaKnown RBP11.12□□□□□ -0.63
NUP93-220ENST00000569842 TNFRSF10DQ9UBN6 386 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 SPIN1Q9Y657 262 aaPredicted RBP11.12□□□□□ -0.63
NUP93-220ENST00000569842 A8MVM7 634 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 LINC01387J3KSC0 135 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 ZNF208O43345 1280 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 PIP5K1CO60331 668 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 BMP7P18075 431 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 POU3F2P20265 443 aaPredicted RBP11.12□□□□□ -0.63
NUP93-220ENST00000569842 FPR1P21462 350 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 MAP2K6P52564 334 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 RAC1P63000 192 aa11.12□□□□□ -0.63
NUP93-220ENST00000569842 TMEM176BQ3YBM2 270 aaPredicted RBP11.12□□□□□ -0.63
NUP93-220ENST00000569842 SYT14P1Q58G82 188 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms