RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 ANKRD34AQ69YU3 496 aa18.05■□□□□ 0.48
CLK3-225ENST00000569063 MTDHQ86UE4 582 aaKnown RBP18.05■□□□□ 0.48
CLK3-225ENST00000569063 TMEM19Q96HH6 336 aa18.05■□□□□ 0.48
CLK3-225ENST00000569063 A4GALTQ9NPC4 353 aa18.05■□□□□ 0.48
CLK3-225ENST00000569063 RLIMQ9NVW2 624 aa18.05■□□□□ 0.48
CLK3-225ENST00000569063 SLC25A37Q9NYZ2 338 aa18.05■□□□□ 0.48
CLK3-225ENST00000569063 GPR52Q9Y2T5 361 aa18.05■□□□□ 0.48
CLK3-225ENST00000569063 HDGFL3Q9Y3E1 203 aa18.05■□□□□ 0.48
CLK3-225ENST00000569063 GMEB1Q9Y692 573 aa18.05■□□□□ 0.48
CLK3-225ENST00000569063 SPG11Q96JI7 2443 aa18.05■□□□□ 0.48
CLK3-225ENST00000569063 CCDC168Q8NDH2 2452 aa18.05■□□□□ 0.48
CLK3-225ENST00000569063 ZNF724A8MTY0 619 aa18.04■□□□□ 0.48
CLK3-225ENST00000569063 NR5A2O00482 541 aa18.04■□□□□ 0.48
CLK3-225ENST00000569063 ATE1O95260 518 aa18.04■□□□□ 0.48
CLK3-225ENST00000569063 THBDP07204 575 aa18.04■□□□□ 0.48
CLK3-225ENST00000569063 FESP07332 822 aa18.04■□□□□ 0.48
CLK3-225ENST00000569063 THBS1P07996 1170 aa18.04■□□□□ 0.48
CLK3-225ENST00000569063 TFPIP10646 304 aa18.04■□□□□ 0.48
CLK3-225ENST00000569063 UQCRBP14927 111 aa18.04■□□□□ 0.48
CLK3-225ENST00000569063 POLR2HP52434 150 aaKnown RBP18.04■□□□□ 0.48
CLK3-225ENST00000569063 SQLEQ14534 574 aa18.04■□□□□ 0.48
CLK3-225ENST00000569063 ZSWIM7Q19AV6 140 aa18.04■□□□□ 0.48
CLK3-225ENST00000569063 RNF220Q5VTB9 566 aa18.04■□□□□ 0.48
CLK3-225ENST00000569063 PRAMEF8Q5VWM4 474 aa18.04■□□□□ 0.48
CLK3-225ENST00000569063 PRAMEF7Q5VXH5 474 aa18.04■□□□□ 0.48
CLK3-225ENST00000569063 ZNF836Q6ZNA1 936 aa18.04■□□□□ 0.48
CLK3-225ENST00000569063 VRK2Q86Y07 508 aa18.04■□□□□ 0.48
CLK3-225ENST00000569063 GABRG1Q8N1C3 465 aa18.04■□□□□ 0.48
CLK3-225ENST00000569063 ARL5BQ96KC2 179 aa18.04■□□□□ 0.48
CLK3-225ENST00000569063 HDHD5Q9BXW7 423 aa18.04■□□□□ 0.48
CLK3-225ENST00000569063 BCL2L10Q9HD36 194 aa18.04■□□□□ 0.48
CLK3-225ENST00000569063 OSGIN1Q9UJX0 560 aa18.04■□□□□ 0.48
CLK3-225ENST00000569063 TMED7-TICAM2A0A0A6YYA0 188 aa18.03■□□□□ 0.48
CLK3-225ENST00000569063 ZNF208O43345 1280 aa18.03■□□□□ 0.48
CLK3-225ENST00000569063 DNPH1O43598 174 aa18.03■□□□□ 0.48
CLK3-225ENST00000569063 GCM2O75603 506 aaPredicted RBP18.03■□□□□ 0.48
CLK3-225ENST00000569063 KLK2P20151 261 aa18.03■□□□□ 0.48
CLK3-225ENST00000569063 TACR3P29371 465 aa18.03■□□□□ 0.48
CLK3-225ENST00000569063 LARS2Q15031 903 aaKnown RBP18.03■□□□□ 0.48
CLK3-225ENST00000569063 PDK3Q15120 406 aa18.03■□□□□ 0.48
CLK3-225ENST00000569063 AGKQ53H12 422 aa18.03■□□□□ 0.48
CLK3-225ENST00000569063 RPS26P11Q5JNZ5 115 aaPredicted RBP18.03■□□□□ 0.48
CLK3-225ENST00000569063 PAGE3Q5JUK9 113 aa18.03■□□□□ 0.48
CLK3-225ENST00000569063 CXorf67Q86X51 503 aaPredicted RBP18.03■□□□□ 0.48
CLK3-225ENST00000569063 MSRB3Q8IXL7 192 aa18.03■□□□□ 0.48
CLK3-225ENST00000569063 PIK3IP1Q96FE7 263 aa18.03■□□□□ 0.48
CLK3-225ENST00000569063 ZC3HAV1LQ96H79 300 aaKnown RBP18.03■□□□□ 0.48
CLK3-225ENST00000569063 ALPK1Q96QP1 1244 aa18.03■□□□□ 0.48
CLK3-225ENST00000569063 OR11A1Q9GZK7 315 aa18.03■□□□□ 0.48
CLK3-225ENST00000569063 ADAM19Q9H013 955 aa18.03■□□□□ 0.48
CLK3-225ENST00000569063 RABEP2Q9H5N1 569 aa18.03■□□□□ 0.48
CLK3-225ENST00000569063 SLAMF8Q9P0V8 285 aa18.03■□□□□ 0.48
CLK3-225ENST00000569063 ZNF232Q9UNY5 417 aa18.03■□□□□ 0.48
CLK3-225ENST00000569063 TRAPPC4Q9Y296 219 aa18.03■□□□□ 0.48
CLK3-225ENST00000569063 ZNF443Q9Y2A4 671 aaPredicted RBP18.03■□□□□ 0.48
CLK3-225ENST00000569063 TMED7Q9Y3B3 224 aa18.03■□□□□ 0.48
CLK3-225ENST00000569063 IGKV3D-15A0A087WSY6 115 aa18.02■□□□□ 0.48
CLK3-225ENST00000569063 EDF1O60869 148 aaKnown RBP18.02■□□□□ 0.48
CLK3-225ENST00000569063 NUDT7P0C024 238 aa18.02■□□□□ 0.48
CLK3-225ENST00000569063 PPIBP23284 216 aaKnown RBP18.02■□□□□ 0.48
CLK3-225ENST00000569063 LOXP28300 417 aaPredicted RBP18.02■□□□□ 0.48
CLK3-225ENST00000569063 ACAA2P42765 397 aaKnown RBP18.02■□□□□ 0.48
CLK3-225ENST00000569063 OR3A2P47893 321 aa18.02■□□□□ 0.48
CLK3-225ENST00000569063 KEAP1Q14145 624 aa18.02■□□□□ 0.48
CLK3-225ENST00000569063 ABLIM2Q6H8Q1 611 aa18.02■□□□□ 0.48
CLK3-225ENST00000569063 STEAP2Q8NFT2 490 aa18.02■□□□□ 0.48
CLK3-225ENST00000569063 ZHX1-C8orf76Q96EF9 292 aa18.02■□□□□ 0.48
CLK3-225ENST00000569063 ZNF300Q96RE9 604 aaPredicted RBP18.02■□□□□ 0.48
CLK3-225ENST00000569063 SPATA9Q9BWV2 254 aa18.02■□□□□ 0.48
CLK3-225ENST00000569063 ACTR6Q9GZN1 396 aa18.02■□□□□ 0.48
CLK3-225ENST00000569063 VAPAQ9P0L0 249 aa18.02■□□□□ 0.48
CLK3-225ENST00000569063 TMEM181Q9P2C4 612 aa18.02■□□□□ 0.48
CLK3-225ENST00000569063 IFT52Q9Y366 437 aa18.02■□□□□ 0.48
CLK3-225ENST00000569063 CHST2Q9Y4C5 530 aa18.02■□□□□ 0.48
CLK3-225ENST00000569063 TRBV5-3A0A0A0MS03 114 aa18.01■□□□□ 0.47
CLK3-225ENST00000569063 A0A1W2PP18 115 aa18.01■□□□□ 0.47
CLK3-225ENST00000569063 TMEM72A0PK05 275 aa18.01■□□□□ 0.47
CLK3-225ENST00000569063 ZNF814B7Z6K7 855 aa18.01■□□□□ 0.47
CLK3-225ENST00000569063 GKN3PP0CG01 181 aa18.01■□□□□ 0.47
CLK3-225ENST00000569063 CCNA2P20248 432 aa18.01■□□□□ 0.47
CLK3-225ENST00000569063 H3F3AP84243 136 aa18.01■□□□□ 0.47
CLK3-225ENST00000569063 P2RY6Q15077 328 aa18.01■□□□□ 0.47
CLK3-225ENST00000569063 SFRP5Q5T4F7 317 aa18.01■□□□□ 0.47
CLK3-225ENST00000569063 CLIP4Q8N3C7 705 aa18.01■□□□□ 0.47
CLK3-225ENST00000569063 MAL2Q969L2 176 aa18.01■□□□□ 0.47
CLK3-225ENST00000569063 DDIT4LQ96D03 193 aa18.01■□□□□ 0.47
CLK3-225ENST00000569063 THOC1Q96FV9 657 aaKnown RBP18.01■□□□□ 0.47
CLK3-225ENST00000569063 SIKE1Q9BRV8 207 aa18.01■□□□□ 0.47
CLK3-225ENST00000569063 ZNF385DQ9H6B1 395 aa18.01■□□□□ 0.47
CLK3-225ENST00000569063 ARMC7Q9H6L4 198 aa18.01■□□□□ 0.47
CLK3-225ENST00000569063 CACYBPQ9HB71 228 aaKnown RBP18.01■□□□□ 0.47
CLK3-225ENST00000569063 ZNF716A6NP11 495 aa18■□□□□ 0.47
CLK3-225ENST00000569063 KLF4O43474 513 aa18■□□□□ 0.47
CLK3-225ENST00000569063 PGM3O95394 542 aa18■□□□□ 0.47
CLK3-225ENST00000569063 ADAP00813 363 aa18■□□□□ 0.47
CLK3-225ENST00000569063 CD53P19397 219 aa18■□□□□ 0.47
CLK3-225ENST00000569063 DEFB113Q30KQ7 82 aa18■□□□□ 0.47
CLK3-225ENST00000569063 WBP2NLQ6ICG8 309 aa18■□□□□ 0.47
CLK3-225ENST00000569063 Q6ZT83 130 aa18■□□□□ 0.47
CLK3-225ENST00000569063 GALNT5Q7Z7M9 940 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms