RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 IGKV3D-15A0A087WSY6 115 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 H3BNH8 94 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 PDLIM1O00151 329 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 PIP5K1BO14986 540 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 PLIN3O60664 434 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 LCN1P31025 176 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 OR2B6P58173 313 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 PHC1P78364 1004 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 SWI5Q1ZZU3 235 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 KANK2Q63ZY3 851 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 ZCCHC12Q6PEW1 402 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 SPATA19Q7Z5L4 167 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 LCA5Q86VQ0 697 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 P2RY8Q86VZ1 359 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 C10orf107Q8IVU9 208 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 DDIASQ8IXT1 998 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 CLECL1Q8IZS7 167 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 CCDC63Q8NA47 563 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 MUS81Q96NY9 551 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 USB1Q9BQ65 265 aaKnown RBP12.97□□□□□ -0.33
USB1-214ENST00000568848 PIMREGQ9BSJ6 248 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 TRMOQ9BU70 441 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 TAS2R16Q9NYV7 291 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 ATP6V1HQ9UI12 483 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 FAF1Q9UNN5 650 aaPredicted RBP12.97□□□□□ -0.33
USB1-214ENST00000568848 MGAT4BQ9UQ53 548 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 DNAJC15Q9Y5T4 150 aa12.97□□□□□ -0.33
USB1-214ENST00000568848 LYNX1G3V0Z9 82 aa12.96□□□□□ -0.33
USB1-214ENST00000568848 ETV2O00321 342 aaPredicted RBP12.96□□□□□ -0.33
USB1-214ENST00000568848 AP3D1O14617 1153 aa12.96□□□□□ -0.33
USB1-214ENST00000568848 PEX11AO75192 247 aa12.96□□□□□ -0.33
USB1-214ENST00000568848 UGT2B17O75795 530 aa12.96□□□□□ -0.33
USB1-214ENST00000568848 CSTAP01040 98 aa12.96□□□□□ -0.33
USB1-214ENST00000568848 LYNX1P0DP58 116 aa12.96□□□□□ -0.33
USB1-214ENST00000568848 VSNL1P62760 191 aa12.96□□□□□ -0.33
USB1-214ENST00000568848 TRIP10Q15642 601 aa12.96□□□□□ -0.33
USB1-214ENST00000568848 ZNF544Q6NX49 715 aa12.96□□□□□ -0.33
USB1-214ENST00000568848 MTDHQ86UE4 582 aaKnown RBP12.96□□□□□ -0.33
USB1-214ENST00000568848 ZG16BQ96DA0 208 aa12.96□□□□□ -0.33
USB1-214ENST00000568848 ZNF764Q96H86 408 aaPredicted RBP12.96□□□□□ -0.33
USB1-214ENST00000568848 C3orf30Q96M34 536 aa12.96□□□□□ -0.33
USB1-214ENST00000568848 CCDC106Q9BWC9 280 aa12.96□□□□□ -0.33
USB1-214ENST00000568848 GATA5Q9BWX5 397 aaPredicted RBP12.96□□□□□ -0.33
USB1-214ENST00000568848 LAT2Q9GZY6 243 aa12.96□□□□□ -0.33
USB1-214ENST00000568848 SLC17A5Q9NRA2 495 aa12.96□□□□□ -0.33
USB1-214ENST00000568848 OXSMQ9NWU1 459 aa12.96□□□□□ -0.33
USB1-214ENST00000568848 IGHV1-18A0A0C4DH31 117 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 TLDC2A0PJX2 215 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 ZC3H12DA2A288 527 aaKnown RBP12.95□□□□□ -0.34
USB1-214ENST00000568848 NR5A2O00482 541 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 CFLARO15519 480 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 EIF4E2O60573 245 aaKnown RBP12.95□□□□□ -0.34
USB1-214ENST00000568848 GLRA3O75311 464 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 MRPL33O75394 65 aaKnown RBP12.95□□□□□ -0.34
USB1-214ENST00000568848 VENTXO95231 258 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 IMPDH2P12268 514 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 CPA3P15088 417 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 CFPP27918 469 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 APOBEC3AP31941 199 aaPredicted RBP12.95□□□□□ -0.34
USB1-214ENST00000568848 HPCAL1P37235 193 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 CCNIQ14094 377 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 PCLAFQ15004 111 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 RINLQ6ZS11 566 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 MYPOPQ86VE0 399 aaPredicted RBP12.95□□□□□ -0.34
USB1-214ENST00000568848 C4orf33Q8N1A6 199 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 DEPDC4Q8N2C3 294 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 OR56A1Q8NGH5 318 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 TWIST2Q8WVJ9 160 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 OR5P2Q8WZ92 322 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 RAB8BQ92930 207 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 SNX18Q96RF0 628 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 BHLHE41Q9C0J9 482 aaPredicted RBP12.95□□□□□ -0.34
USB1-214ENST00000568848 HOXD1Q9GZZ0 328 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 ACER3Q9NUN7 267 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 EMC3Q9P0I2 261 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 MALT1Q9UDY8 824 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 PMF1-BGLAPU3KQ54 211 aa12.95□□□□□ -0.34
USB1-214ENST00000568848 ARRB2P32121 409 aa12.94□□□□□ -0.34
USB1-214ENST00000568848 CRHR1P34998 444 aa12.94□□□□□ -0.34
USB1-214ENST00000568848 ASMTP46597 345 aa12.94□□□□□ -0.34
USB1-214ENST00000568848 DNAJB13P59910 316 aa12.94□□□□□ -0.34
USB1-214ENST00000568848 HBA1P69905 142 aa12.94□□□□□ -0.34
USB1-214ENST00000568848 CHRNB3Q05901 458 aa12.94□□□□□ -0.34
USB1-214ENST00000568848 FUT5Q11128 374 aa12.94□□□□□ -0.34
USB1-214ENST00000568848 UGT3A2Q3SY77 523 aa12.94□□□□□ -0.34
USB1-214ENST00000568848 ZCCHC23Q6ZST2 131 aa12.94□□□□□ -0.34
USB1-214ENST00000568848 SLC46A3Q7Z3Q1 461 aa12.94□□□□□ -0.34
USB1-214ENST00000568848 ADGRG3Q86Y34 549 aa12.94□□□□□ -0.34
USB1-214ENST00000568848 ZNF563Q8TA94 476 aa12.94□□□□□ -0.34
USB1-214ENST00000568848 ZNF385AQ96PM9 386 aaKnown RBP12.94□□□□□ -0.34
USB1-214ENST00000568848 MECRQ9BV79 373 aa12.94□□□□□ -0.34
USB1-214ENST00000568848 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.94□□□□□ -0.34
USB1-214ENST00000568848 FLVCR1Q9Y5Y0 555 aa12.94□□□□□ -0.34
USB1-214ENST00000568848 V9GYY5 206 aaPredicted RBP12.94□□□□□ -0.34
USB1-214ENST00000568848 TMEM72A0PK05 275 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 COPEO14579 308 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 DNAJA2O60884 412 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 HSPA4LO95757 839 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 LGI1O95970 557 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 PGRP06401 933 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms