RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 SLC2A5P22732 501 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 ETV6P41212 452 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 RPS7P62081 194 aaKnown RBP16.61■□□□□ 0.25
SMPD3-211ENST00000568373 SQSTM1Q13501 440 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 OXA1LQ15070 435 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 TRIM16LQ309B1 348 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 CD200R1LQ6Q8B3 271 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 CBLN3Q6UW01 205 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 SAP25Q8TEE9 199 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 OR51V1Q9H2C8 321 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 RERGLQ9H628 205 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 COPS7AQ9UBW8 275 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 CTSFQ9UBX1 484 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 CHRNA9Q9UGM1 479 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 SUSD2Q9UGT4 822 aa16.61■□□□□ 0.25
SMPD3-211ENST00000568373 LY6G6EA0A0G2JKS1 128 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 SAGE2PA6NJ88 616 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 GTPBP1O00178 669 aaKnown RBP16.6■□□□□ 0.25
SMPD3-211ENST00000568373 LRRTM2O43300 516 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 PNMTP11086 282 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 LCN1P31025 176 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 CCR4P51679 360 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 CSTF1Q05048 431 aaKnown RBP16.6■□□□□ 0.25
SMPD3-211ENST00000568373 CRTC2Q53ET0 693 aaPredicted RBP16.6■□□□□ 0.25
SMPD3-211ENST00000568373 RHBDD2Q6NTF9 364 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 TMPRSS11AQ6ZMR5 421 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 WDR5BQ86VZ2 330 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 PRR22Q8IZ63 422 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 PARP16Q8N5Y8 322 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 LRRC17Q8N6Y2 441 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 CYB561A3Q8NBI2 242 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 OR5M3Q8NGP4 307 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 OR1N1Q8NGS0 311 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 KCTD7Q96MP8 289 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 ERMAPQ96PL5 475 aaPredicted RBP16.6■□□□□ 0.25
SMPD3-211ENST00000568373 NRSN2Q9GZP1 204 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 SMURF1Q9HCE7 757 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 U3KQA8 63 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 IGKV1D-42A0A075B6H8 117 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 ELOA3DA6NLF2 546 aaPredicted RBP16.6■□□□□ 0.25
SMPD3-211ENST00000568373 LRRN3E7EW58 273 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 ICOSLGO75144 302 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 UPK1BO75841 260 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 CDRT1O95170 752 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 ANKRD34CP0C6C1 535 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 CLUP10909 449 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 SLC16A1P53985 500 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 FABP5Q01469 135 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 DBPQ10586 325 aaPredicted RBP16.6■□□□□ 0.25
SMPD3-211ENST00000568373 ELOA3BQ3SY89 546 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 HLA-DQA1Q5Y7H0 255 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 COX15Q7KZN9 410 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 ATG4DQ86TL0 474 aaPredicted RBP16.6■□□□□ 0.25
SMPD3-211ENST00000568373 TMEM99Q8N816 258 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 ELOA3Q8NG57 546 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 SLC25A46Q96AG3 418 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 WWTR1Q9GZV5 400 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 LRRN3Q9H3W5 708 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 INPP5EQ9NRR6 644 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 ZNF337Q9Y3M9 751 aa16.6■□□□□ 0.25
SMPD3-211ENST00000568373 ASCC3Q8N3C0 2202 aaKnown RBP16.59■□□□□ 0.25
SMPD3-211ENST00000568373 HTR3EA5X5Y0 456 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 ANKRD33BA6NCL7 494 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 CTDSP2O14595 271 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 TO15178 435 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 SIGLEC6O43699 453 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 REM1O75628 298 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 OR7A10O76100 309 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 PDGFBP01127 241 aaPredicted RBP16.59■□□□□ 0.25
SMPD3-211ENST00000568373 TDGF1P13385 188 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 CELP19835 753 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 IL12BP29460 328 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 FGF9P31371 208 aaPredicted RBP16.59■□□□□ 0.25
SMPD3-211ENST00000568373 PSMD7P51665 324 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 ACY1Q03154 408 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 SPANXN2Q5MJ10 180 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 CCDC190Q86UF4 302 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 PLPP5Q8NEB5 264 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 LRFN5Q96NI6 719 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 ALG8Q9BVK2 526 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 SLC7A5P2Q9GIP4 190 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 TPK1Q9H3S4 243 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 FSCN3Q9NQT6 498 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 SLC22A11Q9NSA0 550 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 HAO2Q9NYQ3 351 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 FBXL4Q9UKA2 621 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 GSTK1Q9Y2Q3 226 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 NCOR1O75376 2440 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 MPDZO75970 2070 aa16.59■□□□□ 0.25
SMPD3-211ENST00000568373 TRDV1A0A1B0GX56 115 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 A0A1W2PQM1 296 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 CDC14CA4D256 554 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 MCIDASD6RGH6 385 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 IGF2P01344 180 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 NR0B1P51843 470 aaKnown RBP16.58■□□□□ 0.25
SMPD3-211ENST00000568373 BDH1Q02338 343 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 MXD1Q05195 221 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 RUNX1T1Q06455 604 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 HLA-BQ31612 363 aa16.58■□□□□ 0.25
SMPD3-211ENST00000568373 DESI1Q6ICB0 168 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms