RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 ATG4DQ86TL0 474 aaPredicted RBP10.55□□□□□ -0.72
UBR1-206ENST00000566493 ARFGAP2Q8N6H7 521 aa10.55□□□□□ -0.72
UBR1-206ENST00000566493 PIGXQ8TBF5 258 aa10.55□□□□□ -0.72
UBR1-206ENST00000566493 ZNF75CPQ92670 426 aaPredicted RBP10.55□□□□□ -0.72
UBR1-206ENST00000566493 APH1AQ96BI3 265 aa10.55□□□□□ -0.72
UBR1-206ENST00000566493 TESCQ96BS2 214 aa10.55□□□□□ -0.72
UBR1-206ENST00000566493 CCDC106Q9BWC9 280 aa10.55□□□□□ -0.72
UBR1-206ENST00000566493 REG4Q9BYZ8 158 aa10.55□□□□□ -0.72
UBR1-206ENST00000566493 TRIM2Q9C040 744 aa10.55□□□□□ -0.72
UBR1-206ENST00000566493 BARX1Q9HBU1 254 aaPredicted RBP10.55□□□□□ -0.72
UBR1-206ENST00000566493 CTPS2Q9NRF8 586 aa10.55□□□□□ -0.72
UBR1-206ENST00000566493 HDGFL3Q9Y3E1 203 aa10.55□□□□□ -0.72
UBR1-206ENST00000566493 FN1P02751 2386 aaKnown RBP10.55□□□□□ -0.72
UBR1-206ENST00000566493 IGKV3D-15A0A087WSY6 115 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 OR5H1A6NKK0 313 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 CCT8L1PA6NM43 557 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 KIAA1324LA8MWY0 1029 aaPredicted RBP10.54□□□□□ -0.72
UBR1-206ENST00000566493 ABCD4O14678 606 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 TM9SF1O15321 606 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 DNPH1O43598 174 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 RAMP1O60894 148 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 MRPL33O75394 65 aaKnown RBP10.54□□□□□ -0.72
UBR1-206ENST00000566493 PGM3O95394 542 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 PMS2P2O95744 297 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 IGHV3-9P01782 118 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 LBPP18428 481 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 COX5AP20674 150 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 ACVR1BP36896 505 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 MAGEA8P43361 318 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 ANXA11P50995 505 aaKnown RBP10.54□□□□□ -0.72
UBR1-206ENST00000566493 OR2B6P58173 313 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 KCNJ10P78508 379 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 CASP8Q14790 479 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 PGGHGQ32M88 737 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 SPANXN4Q5MJ08 99 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 AGAP6Q5VW22 663 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 SAXO2Q658L1 398 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 ABLIM2Q6H8Q1 611 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 SEZ6L2Q6UXD5 910 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 TMEM108Q6UXF1 575 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 LRRC34Q8IZ02 419 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 DEPDC4Q8N2C3 294 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 TRIML2Q8N7C3 387 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 ZNF433Q8N7K0 673 aaPredicted RBP10.54□□□□□ -0.72
UBR1-206ENST00000566493 MAPK1IP1LQ8NDC0 245 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 FAM71CQ8NEG0 241 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 NEURL3Q96EH8 262 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 SLC35A5Q9BS91 424 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 TRAF4Q9BUZ4 470 aaPredicted RBP10.54□□□□□ -0.72
UBR1-206ENST00000566493 NUF2Q9BZD4 464 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 SAP130Q9H0E3 1048 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 SLCO5A1Q9H2Y9 848 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 CENPHQ9H3R5 247 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 SSU72Q9NP77 194 aaKnown RBP10.54□□□□□ -0.72
UBR1-206ENST00000566493 EXOSC3Q9NQT5 275 aaKnown RBP10.54□□□□□ -0.72
UBR1-206ENST00000566493 ASB6Q9NWX5 421 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 POU2F3Q9UKI9 436 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 MGAT4BQ9UQ53 548 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 HIVEP2P31629 2446 aa10.54□□□□□ -0.72
UBR1-206ENST00000566493 ZNF716A6NP11 495 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 SHISA9B4DS77 424 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 E9PBE3 544 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 SCN2BO60939 215 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 RAD51DO75771 328 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 IGHV4-39P01824 125 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 UQCRBP14927 111 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 CCNA2P20248 432 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 BGNP21810 368 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 EDNRAP25101 427 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 IDH2P48735 452 aaKnown RBP10.53□□□□□ -0.72
UBR1-206ENST00000566493 PHC1P78364 1004 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 CHRNEQ04844 493 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 STX3Q13277 289 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 GNA13Q14344 377 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 NRF1Q16656 503 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 FAM174BQ3ZCQ3 159 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 OR7E24Q6IFN5 339 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 WDR93Q6P2C0 686 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 SLC22A25Q6T423 547 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 FRRS1Q6ZNA5 592 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 HMGN2P46Q86SG4 172 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 OR52N5Q8NH56 324 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 PMM1Q92871 262 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 DDIT4LQ96D03 193 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 ZG16BQ96DA0 208 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 DNAJA3Q96EY1 480 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 ARL5BQ96KC2 179 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 ADAD1Q96M93 576 aaKnown RBP10.53□□□□□ -0.72
UBR1-206ENST00000566493 NAA11Q9BSU3 229 aaPredicted RBP10.53□□□□□ -0.72
UBR1-206ENST00000566493 GRIP2Q9C0E4 1043 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 OR11A1Q9GZK7 315 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 KCNK9Q9NPC2 374 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 TMEM181Q9P2C4 612 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 BTNL2Q9UIR0 455 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 TRAPPC4Q9Y296 219 aa10.53□□□□□ -0.72
UBR1-206ENST00000566493 TMED7-TICAM2A0A0A6YYA0 188 aa10.52□□□□□ -0.73
UBR1-206ENST00000566493 CCDC154A6NI56 674 aa10.52□□□□□ -0.73
UBR1-206ENST00000566493 SSX4O60224 188 aa10.52□□□□□ -0.73
UBR1-206ENST00000566493 EIF1BO60739 113 aaKnown RBP10.52□□□□□ -0.73
UBR1-206ENST00000566493 BCAS1O75363 584 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms