RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 DEFB127Q9H1M4 99 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 TSPAN10Q9H1Z9 355 aaPredicted RBP13.38□□□□□ -0.27
SPG7-213ENST00000566221 VCX3BQ9H321 246 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 ANKRD19PQ9H560 264 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 LDAHQ9H6V9 325 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 EXO5Q9H790 373 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 SERINC1Q9NRX5 453 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 AGPAT4Q9NRZ5 378 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 CHRNA9Q9UGM1 479 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 RIMS3Q9UJD0 308 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 OSGIN1Q9UJX0 560 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 SPIN1Q9Y657 262 aaPredicted RBP13.38□□□□□ -0.27
SPG7-213ENST00000566221 TMED7-TICAM2A0A0A6YYA0 188 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 NPIPA5E9PKD4 350 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 H0Y3Z8 333 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 SUSD5O60279 629 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 LYPD3O95274 346 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 CST1P01037 141 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 H1F0P07305 194 aaKnown RBP13.37□□□□□ -0.27
SPG7-213ENST00000566221 GFRA1P56159 465 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 FOXK1P85037 733 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 NFATC3Q12968 1075 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 TRAM2Q15035 370 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 COLEC12Q5KU26 742 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 ZNF324BQ6AW86 544 aaPredicted RBP13.37□□□□□ -0.27
SPG7-213ENST00000566221 OR2T5Q6IEZ7 315 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 POMZP3Q6PJE2 187 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 TRILQ7L0X0 811 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 PIK3C3Q8NEB9 887 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 OR5M1Q8NGP8 315 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 OR2T29Q8NH02 315 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 FAR1Q8WVX9 515 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 GPR137Q96N19 417 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 NMNAT1Q9HAN9 279 aaPredicted RBP13.37□□□□□ -0.27
SPG7-213ENST00000566221 C8orf4Q9NR00 106 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 PLSCR2Q9NRY7 297 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 RHCGQ9UBD6 479 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 NPIPA1Q9UND3 350 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 TMED7Q9Y3B3 224 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 TESMINQ9Y4I5 508 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 LIPGQ9Y5X9 500 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 UNC79Q9P2D8 2635 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 TENM4Q6N022 2769 aa13.37□□□□□ -0.27
SPG7-213ENST00000566221 RP1L1Q8IWN7 2480 aaPredicted RBP13.36□□□□□ -0.27
SPG7-213ENST00000566221 A0A087WUJ7 227 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 A0A1B0GVC2 190 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 A0A1W2PRQ8 180 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 TTLL8A6PVC2 850 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 PYCARD-AS1I3L0S3 204 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 CASQ2O14958 399 aaPredicted RBP13.36□□□□□ -0.27
SPG7-213ENST00000566221 DEAF1O75398 565 aaPredicted RBP13.36□□□□□ -0.27
SPG7-213ENST00000566221 TIPRLO75663 272 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 GADD45GO95257 159 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 ACTL6AO96019 429 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 LDLRP01130 860 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 THY1P04216 161 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 FKBP2P26885 142 aaKnown RBP13.36□□□□□ -0.27
SPG7-213ENST00000566221 RRM2P31350 389 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 RBM34P42696 430 aaKnown RBP13.36□□□□□ -0.27
SPG7-213ENST00000566221 DGCR6Q14129 220 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 GK3PQ14409 553 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 ATP6AP1Q15904 470 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 KRTCAP3Q53RY4 240 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 NHSL2Q5HYW2 709 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 FGD3Q5JSP0 725 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 ADGRG3Q86Y34 549 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 GHDCQ8N2G8 530 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 SNRNP40Q96DI7 357 aaKnown RBP13.36□□□□□ -0.27
SPG7-213ENST00000566221 CENPNQ96H22 339 aaPredicted RBP13.36□□□□□ -0.27
SPG7-213ENST00000566221 SLX1AQ9BQ83 275 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 BDH2Q9BUT1 245 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 REEP1Q9H902 201 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 MAN2C1Q9NTJ4 1040 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 DNAJB9Q9UBS3 223 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 NKX1-2Q9UD57 310 aaPredicted RBP13.36□□□□□ -0.27
SPG7-213ENST00000566221 SLC6A5Q9Y345 797 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 AP4B1Q9Y6B7 739 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 ARHGAP21Q5T5U3 1957 aa13.36□□□□□ -0.27
SPG7-213ENST00000566221 GJE1A6NN92 205 aa13.35□□□□□ -0.27
SPG7-213ENST00000566221 H3BML4 177 aa13.35□□□□□ -0.27
SPG7-213ENST00000566221 AQP7O14520 342 aa13.35□□□□□ -0.27
SPG7-213ENST00000566221 GNGT2O14610 69 aa13.35□□□□□ -0.27
SPG7-213ENST00000566221 ZNF208O43345 1280 aa13.35□□□□□ -0.27
SPG7-213ENST00000566221 WISP1O95388 367 aa13.35□□□□□ -0.27
SPG7-213ENST00000566221 POU3F2P20265 443 aaPredicted RBP13.35□□□□□ -0.27
SPG7-213ENST00000566221 TDGF1P3P51864 188 aa13.35□□□□□ -0.27
SPG7-213ENST00000566221 RAC1P63000 192 aa13.35□□□□□ -0.27
SPG7-213ENST00000566221 PRR30Q53SZ7 412 aaPredicted RBP13.35□□□□□ -0.27
SPG7-213ENST00000566221 SYT14P1Q58G82 188 aa13.35□□□□□ -0.27
SPG7-213ENST00000566221 ARHGAP11AQ6P4F7 1023 aa13.35□□□□□ -0.27
SPG7-213ENST00000566221 C5orf46Q6UWT4 87 aa13.35□□□□□ -0.27
SPG7-213ENST00000566221 LINC00114Q6XXX2 140 aa13.35□□□□□ -0.27
SPG7-213ENST00000566221 ABTB1Q969K4 478 aaPredicted RBP13.35□□□□□ -0.27
SPG7-213ENST00000566221 DDIT4LQ96D03 193 aa13.35□□□□□ -0.27
SPG7-213ENST00000566221 HS6ST2Q96MM7 605 aa13.35□□□□□ -0.27
SPG7-213ENST00000566221 BARD1Q99728 777 aaKnown RBP13.35□□□□□ -0.27
SPG7-213ENST00000566221 PRSS27Q9BQR3 290 aa13.35□□□□□ -0.27
SPG7-213ENST00000566221 TMEM43Q9BTV4 400 aa13.35□□□□□ -0.27
SPG7-213ENST00000566221 ZNF426Q9BUY5 554 aa13.35□□□□□ -0.27
SPG7-213ENST00000566221 ASF1BQ9NVP2 202 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms