RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 ESRRGP62508 458 aa27.74■■■□□ 2.03
CTCF-203ENST00000566078 FOXF1Q12946 379 aa27.74■■■□□ 2.03
CTCF-203ENST00000566078 PLPPR5Q32ZL2 321 aa27.74■■■□□ 2.03
CTCF-203ENST00000566078 FDCSPQ8NFU4 85 aa27.74■■■□□ 2.03
CTCF-203ENST00000566078 SLC19A3Q9BZV2 496 aa27.74■■■□□ 2.03
CTCF-203ENST00000566078 KCNMB2Q9Y691 235 aa27.74■■■□□ 2.03
CTCF-203ENST00000566078 TMED7-TICAM2A0A0A6YYA0 188 aa27.74■■■□□ 2.03
CTCF-203ENST00000566078 OR5H15A6NDH6 313 aa27.74■■■□□ 2.03
CTCF-203ENST00000566078 CDK2AP1O14519 115 aa27.74■■■□□ 2.03
CTCF-203ENST00000566078 CDC42EP2O14613 210 aa27.74■■■□□ 2.03
CTCF-203ENST00000566078 ADRB1P08588 477 aa27.74■■■□□ 2.03
CTCF-203ENST00000566078 GPR85P60893 370 aa27.74■■■□□ 2.03
CTCF-203ENST00000566078 TIGD3Q6B0B8 471 aa27.74■■■□□ 2.03
CTCF-203ENST00000566078 Q6ZPB1 254 aaPredicted RBP27.74■■■□□ 2.03
CTCF-203ENST00000566078 USP51Q70EK9 711 aa27.74■■■□□ 2.03
CTCF-203ENST00000566078 MARVELD2Q8N4S9 558 aa27.74■■■□□ 2.03
CTCF-203ENST00000566078 NPAS1Q99742 590 aa27.74■■■□□ 2.03
CTCF-203ENST00000566078 DEPPQ9NTK1 212 aa27.74■■■□□ 2.03
CTCF-203ENST00000566078 TMED7Q9Y3B3 224 aa27.74■■■□□ 2.03
CTCF-203ENST00000566078 FRYQ5TBA9 3013 aa27.73■■■□□ 2.03
CTCF-203ENST00000566078 H3BN98 237 aa27.73■■■□□ 2.03
CTCF-203ENST00000566078 TP53P04637 393 aaPredicted RBP27.73■■■□□ 2.03
CTCF-203ENST00000566078 IGFBP1P08833 259 aaPredicted RBP27.73■■■□□ 2.03
CTCF-203ENST00000566078 MYF6P23409 242 aa27.73■■■□□ 2.03
CTCF-203ENST00000566078 POU1F1P28069 291 aa27.73■■■□□ 2.03
CTCF-203ENST00000566078 CRISP1P54107 249 aa27.73■■■□□ 2.03
CTCF-203ENST00000566078 DLX5P56178 289 aa27.73■■■□□ 2.03
CTCF-203ENST00000566078 CCDC81Q6ZN84 652 aa27.73■■■□□ 2.03
CTCF-203ENST00000566078 SPACA3Q8IXA5 215 aa27.73■■■□□ 2.03
CTCF-203ENST00000566078 ACACAQ13085 2346 aa27.73■■■□□ 2.03
CTCF-203ENST00000566078 CNR1P21554 472 aa27.72■■■□□ 2.03
CTCF-203ENST00000566078 TCEA1P23193 301 aaKnown RBP27.72■■■□□ 2.03
CTCF-203ENST00000566078 CHMP24386 653 aa27.72■■■□□ 2.03
CTCF-203ENST00000566078 TPD52P55327 224 aaPredicted RBP27.72■■■□□ 2.03
CTCF-203ENST00000566078 PDK3Q15120 406 aa27.72■■■□□ 2.03
CTCF-203ENST00000566078 TMPRSS11FQ6ZWK6 438 aa27.72■■■□□ 2.03
CTCF-203ENST00000566078 KIF18BQ86Y91 864 aa27.72■■■□□ 2.03
CTCF-203ENST00000566078 MUS81Q96NY9 551 aa27.72■■■□□ 2.03
CTCF-203ENST00000566078 GNRHR2Q96P88 292 aa27.72■■■□□ 2.03
CTCF-203ENST00000566078 RNF32Q9H0A6 362 aa27.72■■■□□ 2.03
CTCF-203ENST00000566078 SSUH2Q9Y2M2 353 aa27.72■■■□□ 2.03
CTCF-203ENST00000566078 PCDHGB6Q9Y5F9 930 aa27.72■■■□□ 2.03
CTCF-203ENST00000566078 GMPPBQ9Y5P6 360 aa27.72■■■□□ 2.03
CTCF-203ENST00000566078 TNRC6AQ8NDV7 1962 aaKnown RBP27.72■■■□□ 2.03
CTCF-203ENST00000566078 TMEM72A0PK05 275 aa27.71■■■□□ 2.03
CTCF-203ENST00000566078 UNC119BA6NIH7 251 aa27.71■■■□□ 2.03
CTCF-203ENST00000566078 EFCAB9A8MZ26 197 aa27.71■■■□□ 2.03
CTCF-203ENST00000566078 SHISA8B8ZZ34 492 aa27.71■■■□□ 2.03
CTCF-203ENST00000566078 ETV2O00321 342 aaPredicted RBP27.71■■■□□ 2.03
CTCF-203ENST00000566078 SUSD5O60279 629 aa27.71■■■□□ 2.03
CTCF-203ENST00000566078 SAGP10523 405 aaPredicted RBP27.71■■■□□ 2.03
CTCF-203ENST00000566078 FUT1P19526 365 aa27.71■■■□□ 2.03
CTCF-203ENST00000566078 EIF2S3P41091 472 aaKnown RBP27.71■■■□□ 2.03
CTCF-203ENST00000566078 KEAP1Q14145 624 aa27.71■■■□□ 2.03
CTCF-203ENST00000566078 RASSF6Q6ZTQ3 369 aa27.71■■■□□ 2.03
CTCF-203ENST00000566078 ADGRG3Q86Y34 549 aa27.71■■■□□ 2.03
CTCF-203ENST00000566078 SGTBQ96EQ0 304 aa27.71■■■□□ 2.03
CTCF-203ENST00000566078 PITX2Q99697 317 aa27.71■■■□□ 2.03
CTCF-203ENST00000566078 HES7Q9BYE0 225 aa27.71■■■□□ 2.03
CTCF-203ENST00000566078 EGLN3Q9H6Z9 239 aa27.71■■■□□ 2.03
CTCF-203ENST00000566078 TUBA8Q9NY65 449 aaPredicted RBP27.71■■■□□ 2.03
CTCF-203ENST00000566078 UBAP1Q9NZ09 502 aa27.71■■■□□ 2.03
CTCF-203ENST00000566078 E9PQ18 207 aa27.7■■■□□ 2.03
CTCF-203ENST00000566078 ARG2P78540 354 aa27.7■■■□□ 2.03
CTCF-203ENST00000566078 EGR4Q05215 589 aa27.7■■■□□ 2.03
CTCF-203ENST00000566078 SLC25A53Q5H9E4 307 aa27.7■■■□□ 2.03
CTCF-203ENST00000566078 MDS2Q8NDY4 140 aa27.7■■■□□ 2.03
CTCF-203ENST00000566078 MRGPRX4Q96LA9 322 aa27.7■■■□□ 2.03
CTCF-203ENST00000566078 DKKL1Q9UK85 242 aa27.7■■■□□ 2.03
CTCF-203ENST00000566078 NDRG4Q9ULP0 352 aaKnown RBP27.7■■■□□ 2.03
CTCF-203ENST00000566078 PCDHGB5Q9Y5G0 923 aa27.7■■■□□ 2.03
CTCF-203ENST00000566078 APOBEC1P41238 236 aaKnown RBP27.7■■■□□ 2.02
CTCF-203ENST00000566078 PTGES3Q15185 160 aaKnown RBP27.7■■■□□ 2.02
CTCF-203ENST00000566078 ZNF691Q5VV52 312 aa27.7■■■□□ 2.02
CTCF-203ENST00000566078 KRT80Q6KB66 452 aa27.7■■■□□ 2.02
CTCF-203ENST00000566078 POC1BQ8TC44 478 aa27.7■■■□□ 2.02
CTCF-203ENST00000566078 HRASLS5Q96KN8 279 aa27.7■■■□□ 2.02
CTCF-203ENST00000566078 DCBLD2Q96PD2 775 aa27.7■■■□□ 2.02
CTCF-203ENST00000566078 A0A087WZY1 265 aa27.69■■■□□ 2.02
CTCF-203ENST00000566078 DPP4P27487 766 aa27.69■■■□□ 2.02
CTCF-203ENST00000566078 DSCR4P56555 118 aaPredicted RBP27.69■■■□□ 2.02
CTCF-203ENST00000566078 IL18R1Q13478 541 aa27.69■■■□□ 2.02
CTCF-203ENST00000566078 C8orf59Q8N0T1 100 aaPredicted RBP27.69■■■□□ 2.02
CTCF-203ENST00000566078 OR13C2Q8NGS9 318 aa27.69■■■□□ 2.02
CTCF-203ENST00000566078 FAM173AQ9BQD7 235 aa27.69■■■□□ 2.02
CTCF-203ENST00000566078 PLA2G12AQ9BZM1 189 aa27.69■■■□□ 2.02
CTCF-203ENST00000566078 KLHL1Q9NR64 748 aa27.69■■■□□ 2.02
CTCF-203ENST00000566078 CFAP47Q6ZTR5 3102 aa27.69■■■□□ 2.02
CTCF-203ENST00000566078 PINLYPA6NC86 204 aa27.68■■■□□ 2.02
CTCF-203ENST00000566078 LRRC3CA6NJW4 275 aa27.68■■■□□ 2.02
CTCF-203ENST00000566078 CBR3O75828 277 aa27.68■■■□□ 2.02
CTCF-203ENST00000566078 CEACAM4O75871 244 aa27.68■■■□□ 2.02
CTCF-203ENST00000566078 ZNF620Q6ZNG0 422 aa27.68■■■□□ 2.02
CTCF-203ENST00000566078 FANK1Q8TC84 345 aa27.68■■■□□ 2.02
CTCF-203ENST00000566078 HAS2Q92819 552 aa27.68■■■□□ 2.02
CTCF-203ENST00000566078 ZBTB8AQ96BR9 441 aa27.68■■■□□ 2.02
CTCF-203ENST00000566078 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP27.68■■■□□ 2.02
CTCF-203ENST00000566078 CHRNA9Q9UGM1 479 aa27.68■■■□□ 2.02
CTCF-203ENST00000566078 ZAR1LA6NP61 321 aa27.67■■■□□ 2.02
CTCF-203ENST00000566078 RRP8O43159 456 aaKnown RBP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms