RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 SLC29A1Q99808 456 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 RBM4BQ9BQ04 359 aaKnown RBP10.07□□□□□ -0.8
SF3B3-205ENST00000564899 FUZQ9BT04 418 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 RBM4Q9BWF3 364 aaKnown RBP10.07□□□□□ -0.8
SF3B3-205ENST00000564899 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.07□□□□□ -0.8
SF3B3-205ENST00000564899 DSN1Q9H410 356 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 SMURF2Q9HAU4 748 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 C8orf4Q9NR00 106 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 MED17Q9NVC6 651 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 TAS2R10Q9NYW0 307 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 APCP25054 2843 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 ESPL1Q14674 2120 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 A0A087WUU8 490 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 SH3PXD2BA1X283 911 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 ARRDC5A6NEK1 342 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 B4DXG7 233 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 OR10H3O60404 316 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 TRIM3O75382 744 aaPredicted RBP10.06□□□□□ -0.8
SF3B3-205ENST00000564899 AGFG2O95081 481 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 NTN1O95631 604 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 HPRP00739 348 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 CD46P15529 392 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 ZNF26P17031 533 aaPredicted RBP10.06□□□□□ -0.8
SF3B3-205ENST00000564899 CNR1P21554 472 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 ALDH3A2P51648 485 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 ZNF41P51814 821 aaPredicted RBP10.06□□□□□ -0.8
SF3B3-205ENST00000564899 GPR85P60893 370 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 PPP2R2BQ00005 443 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 SLC25A25Q6KCM7 469 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 IGFL2Q6UWQ7 119 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 WDR88Q6ZMY6 472 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 RRM2BQ7LG56 351 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 LINC00471Q8N535 108 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 AQP11Q8NBQ7 271 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 MDS2Q8NDY4 140 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 OR4K5Q8NGD3 323 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 OR1J4Q8NGS1 313 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 MAGEE2Q8TD90 523 aaPredicted RBP10.06□□□□□ -0.8
SF3B3-205ENST00000564899 TMEM234Q8WY98 164 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 ST8SIA1Q92185 356 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 HAS2Q92819 552 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 ZNF524Q96C55 264 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 C1GALT1C1Q96EU7 318 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 C5orf34Q96MH7 638 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 PRSS27Q9BQR3 290 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 OSBPL10Q9BXB5 764 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 HES7Q9BYE0 225 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 PTGES2Q9H7Z7 377 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 KLHL1Q9NR64 748 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 DEPPQ9NTK1 212 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 USE1Q9NZ43 259 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 FBXL2Q9UKC9 423 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 PRDM4Q9UKN5 801 aa10.06□□□□□ -0.8
SF3B3-205ENST00000564899 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 LRRC3CA6NJW4 275 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 ELOA3DA6NLF2 546 aaPredicted RBP10.05□□□□□ -0.8
SF3B3-205ENST00000564899 PIP5K1CO60331 668 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 NME2P1O60361 137 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 CLDN1O95832 211 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 ALPLP05186 524 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 SP1P08047 785 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 PNMTP11086 282 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 ANXA8P13928 327 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 PTNP21246 168 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 NME2P22392 152 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 CBLP22681 906 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 IGFBP5P24593 272 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 TACR3P29371 465 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 IFNGR2P38484 337 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 RBM34P42696 430 aaKnown RBP10.05□□□□□ -0.8
SF3B3-205ENST00000564899 UGT2B15P54855 530 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 AQP4P55087 323 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 MERTKQ12866 999 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 KLRB1Q12918 225 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 FOXF1Q12946 379 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 ELOA3BQ3SY89 546 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 PRR30Q53SZ7 412 aaPredicted RBP10.05□□□□□ -0.8
SF3B3-205ENST00000564899 ANKRD34AQ69YU3 496 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 TIGD3Q6B0B8 471 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 FAHD1Q6P587 224 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 ARSKQ6UWY0 536 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 MBOAT2Q6ZWT7 520 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 GRINAQ7Z429 371 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 ATG4DQ86TL0 474 aaPredicted RBP10.05□□□□□ -0.8
SF3B3-205ENST00000564899 NRMQ8IXM6 262 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 ELOA3Q8NG57 546 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 OR2M7Q8NG81 312 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 PIGXQ8TBF5 258 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 TMEM239Q8WW34 195 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 TM9SF4Q92544 642 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 HS6ST2Q96MM7 605 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 FEVQ99581 238 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 SMAD5Q99717 465 aaKnown RBP10.05□□□□□ -0.8
SF3B3-205ENST00000564899 FAM173AQ9BQD7 235 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 PSD2Q9BQI7 771 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 C12orf10Q9HB07 376 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 KRCC1Q9NPI7 259 aaPredicted RBP10.05□□□□□ -0.8
SF3B3-205ENST00000564899 TUBA8Q9NY65 449 aaPredicted RBP10.05□□□□□ -0.8
SF3B3-205ENST00000564899 DKKL1Q9UK85 242 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 BOKQ9UMX3 212 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms