RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 KLHL28Q9NXS3 571 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 ZNF226Q9NYT6 803 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 KLHL13Q9P2N7 655 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 PRDM4Q9UKN5 801 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 EDARQ9UNE0 448 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 NDUFAF1Q9Y375 327 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 TMED7Q9Y3B3 224 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 TESMINQ9Y4I5 508 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 CSMD1Q96PZ7 3565 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 ANGPT2O15123 496 aa16.35■□□□□ 0.21
SYNGR3-204ENST00000564642 GKN3PP0CG01 181 aa16.35■□□□□ 0.21
SYNGR3-204ENST00000564642 TACR3P29371 465 aa16.35■□□□□ 0.21
SYNGR3-204ENST00000564642 SLC1A3P43003 542 aa16.35■□□□□ 0.21
SYNGR3-204ENST00000564642 CLK1P49759 484 aaKnown RBP16.35■□□□□ 0.21
SYNGR3-204ENST00000564642 COPZ1P61923 177 aa16.35■□□□□ 0.21
SYNGR3-204ENST00000564642 RASGEF1BQ0VAM2 473 aa16.35■□□□□ 0.21
SYNGR3-204ENST00000564642 ZNF311Q5JNZ3 666 aa16.35■□□□□ 0.21
SYNGR3-204ENST00000564642 RNF220Q5VTB9 566 aa16.35■□□□□ 0.21
SYNGR3-204ENST00000564642 ZNF550Q7Z398 422 aa16.35■□□□□ 0.21
SYNGR3-204ENST00000564642 NRGNQ92686 78 aa16.35■□□□□ 0.21
SYNGR3-204ENST00000564642 DDIT4LQ96D03 193 aa16.35■□□□□ 0.21
SYNGR3-204ENST00000564642 SPATA9Q9BWV2 254 aa16.35■□□□□ 0.21
SYNGR3-204ENST00000564642 TMEM120AQ9BXJ8 343 aa16.35■□□□□ 0.21
SYNGR3-204ENST00000564642 OSGIN1Q9UJX0 560 aa16.35■□□□□ 0.21
SYNGR3-204ENST00000564642 HDGFL3Q9Y3E1 203 aa16.35■□□□□ 0.21
SYNGR3-204ENST00000564642 SMAD9O15198 467 aaKnown RBP16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 CYTIPO60759 359 aa16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 PGM3O95394 542 aa16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 PMS2P2O95744 297 aa16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 VIMP08670 466 aaKnown RBP16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 CD1EP15812 388 aa16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 GPX2P18283 190 aa16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 MAP2K6P52564 334 aa16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 ANKRD34AQ69YU3 496 aa16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 NUFIP2Q7Z417 695 aaKnown RBP16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 MTDHQ86UE4 582 aaKnown RBP16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 CLIP4Q8N3C7 705 aa16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 CADM2Q8N3J6 435 aa16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 NFKBIDQ8NI38 313 aa16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 TSPEARQ8WU66 669 aa16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 DNAJA3Q96EY1 480 aa16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 ARL5BQ96KC2 179 aa16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 PSD2Q9BQI7 771 aa16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 ZNF385DQ9H6B1 395 aa16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 FGFR1OP2Q9NVK5 253 aa16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 GMEB1Q9Y692 573 aa16.34■□□□□ 0.21
SYNGR3-204ENST00000564642 PDZD2O15018 2839 aa16.33■□□□□ 0.21
SYNGR3-204ENST00000564642 TRBV5-3A0A0A0MS03 114 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 ZNF208O43345 1280 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 FESP07332 822 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 ARAFP10398 606 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 ETS2P15036 469 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 CXCR1P25024 350 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 DNAJA1P31689 397 aaKnown RBP16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 ACAA2P42765 397 aaKnown RBP16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 ARFIP2P53365 341 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 OR2B6P58173 313 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 CDK6Q00534 326 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 POU4F3Q15319 338 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 RUNDC3AQ59EK9 446 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 WBP2NLQ6ICG8 309 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 REEP3Q6NUK4 255 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 DLEU7Q6UYE1 221 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 KRT73Q86Y46 540 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 ZC3HAV1LQ96H79 300 aaKnown RBP16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 OR11A1Q9GZK7 315 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 ADAM19Q9H013 955 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 BCO1Q9HAY6 547 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 MED4Q9NPJ6 270 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 TMEM181Q9P2C4 612 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 TRAPPC4Q9Y296 219 aa16.33■□□□□ 0.2
SYNGR3-204ENST00000564642 TMEM72A0PK05 275 aa16.32■□□□□ 0.2
SYNGR3-204ENST00000564642 PPP3CBP16298 524 aa16.32■□□□□ 0.2
SYNGR3-204ENST00000564642 SLC6A2P23975 617 aa16.32■□□□□ 0.2
SYNGR3-204ENST00000564642 CCKARP32238 428 aa16.32■□□□□ 0.2
SYNGR3-204ENST00000564642 GUCY1A3Q02108 690 aa16.32■□□□□ 0.2
SYNGR3-204ENST00000564642 STAC2Q6ZMT1 411 aa16.32■□□□□ 0.2
SYNGR3-204ENST00000564642 FBN3Q75N90 2809 aa16.32■□□□□ 0.2
SYNGR3-204ENST00000564642 DHDDSQ86SQ9 333 aa16.32■□□□□ 0.2
SYNGR3-204ENST00000564642 SPATA5L1Q9BVQ7 753 aa16.32■□□□□ 0.2
SYNGR3-204ENST00000564642 LIME1Q9H400 295 aa16.32■□□□□ 0.2
SYNGR3-204ENST00000564642 MRGBPQ9NV56 204 aa16.32■□□□□ 0.2
SYNGR3-204ENST00000564642 C6orf203Q9P0P8 240 aaPredicted RBP16.32■□□□□ 0.2
SYNGR3-204ENST00000564642 GPR52Q9Y2T5 361 aa16.32■□□□□ 0.2
SYNGR3-204ENST00000564642 ZNF724A8MTY0 619 aa16.31■□□□□ 0.2
SYNGR3-204ENST00000564642 DNPH1O43598 174 aa16.31■□□□□ 0.2
SYNGR3-204ENST00000564642 HRGP04196 525 aa16.31■□□□□ 0.2
SYNGR3-204ENST00000564642 KLK2P20151 261 aa16.31■□□□□ 0.2
SYNGR3-204ENST00000564642 CRYGSP22914 178 aa16.31■□□□□ 0.2
SYNGR3-204ENST00000564642 SLC35A1P78382 337 aa16.31■□□□□ 0.2
SYNGR3-204ENST00000564642 SF3A3Q12874 501 aaKnown RBP eCLIP16.31■□□□□ 0.2
SYNGR3-204ENST00000564642 NFYCQ13952 458 aa16.31■□□□□ 0.2
SYNGR3-204ENST00000564642 SCARB2Q14108 478 aa16.31■□□□□ 0.2
SYNGR3-204ENST00000564642 TFAP2EQ6VUC0 442 aa16.31■□□□□ 0.2
SYNGR3-204ENST00000564642 SERPINA11Q86U17 422 aa16.31■□□□□ 0.2
SYNGR3-204ENST00000564642 C10orf111Q8N326 155 aa16.31■□□□□ 0.2
SYNGR3-204ENST00000564642 DPP10Q8N608 796 aa16.31■□□□□ 0.2
SYNGR3-204ENST00000564642 PIGXQ8TBF5 258 aa16.31■□□□□ 0.2
SYNGR3-204ENST00000564642 NINJ1Q92982 152 aa16.31■□□□□ 0.2
SYNGR3-204ENST00000564642 ZNF775Q96BV0 537 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms