RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 PLEKHF2Q9H8W4 249 aa13.17□□□□□ -0.3
RPUSD1-204ENST00000563560 FGFR1OP2Q9NVK5 253 aa13.17□□□□□ -0.3
RPUSD1-204ENST00000563560 PROCRQ9UNN8 238 aa13.17□□□□□ -0.3
RPUSD1-204ENST00000563560 ROS1P08922 2347 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 IGKV3D-15A0A087WSY6 115 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 A0A0G2JND7 137 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 TMEM72A0PK05 275 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 ZC3H12DA2A288 527 aaKnown RBP13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 CFAP73A6NFT4 308 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 ZNF716A6NP11 495 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 DEFB108AA8MXU0 73 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 ZNF208O43345 1280 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 FZD7O75084 574 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 SMNDC1O75940 238 aaKnown RBP eCLIP13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 GOSR1O95249 250 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 SYNGR4O95473 234 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 PMS2P2O95744 297 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 THBDP07204 575 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 GKN3PP0CG01 181 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 IMPDH2P12268 514 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 SLC1A3P43003 542 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 CPA2P48052 419 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 PCBP3P57721 371 aaKnown RBP13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 GUCY1A3Q02108 690 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 RNPS1Q15287 305 aaKnown RBP13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 LIN52Q52LA3 116 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 TFAP2EQ6VUC0 442 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 STAC2Q6ZMT1 411 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 NET1Q7Z628 596 aaPredicted RBP13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 CDH24Q86UP0 819 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 TUSC5Q8IXB3 177 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 GABRG1Q8N1C3 465 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 ATP6V1C2Q8NEY4 427 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 SLC35B4Q969S0 331 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 ANKRD27Q96NW4 1050 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 SPATA9Q9BWV2 254 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 OR11A1Q9GZK7 315 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 RAD21L1Q9H4I0 556 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 RABEP2Q9H5N1 569 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 EMC9Q9Y3B6 208 aa13.16□□□□□ -0.3
RPUSD1-204ENST00000563560 TMED7-TICAM2A0A0A6YYA0 188 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 TMEM229AB2RXF0 380 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 FXYD1O00168 92 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 DNPH1O43598 174 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 RAMP1O60894 148 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 NPIPB7O75200 414 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 PRKD3O94806 890 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 ETS2P15036 469 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 TACR3P29371 465 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 DNAJA1P31689 397 aaKnown RBP13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 CPOXP36551 454 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 CLK1P49759 484 aaKnown RBP13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 SLC16A1P53985 500 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 SEZ6L2Q6UXD5 910 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 SERPINA11Q86U17 422 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 CDC20BQ86Y33 519 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 ZNF440Q8IYI8 595 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 ZNF563Q8TA94 476 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 BBS10Q8TAM1 723 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 OR5B2Q96R09 309 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 ZNF300Q96RE9 604 aaPredicted RBP13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 WFDC6Q9BQY6 131 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 CLEC4MQ9H2X3 399 aaPredicted RBP13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 TIGARQ9NQ88 270 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 SAR1AQ9NR31 198 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 LEF1Q9UJU2 399 aaPredicted RBP13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 TRAPPC4Q9Y296 219 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 TMED7Q9Y3B3 224 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 HDGFL3Q9Y3E1 203 aa13.15□□□□□ -0.3
RPUSD1-204ENST00000563560 ZNF724A8MTY0 619 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 TPST1O60507 370 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 TPST2O60704 377 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 FESP07332 822 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 YES1P07947 543 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 POU2F1P14859 743 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 NCF2P19878 526 aaPredicted RBP13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 CRYGSP22914 178 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 PPIBP23284 216 aaKnown RBP13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 SLC7A1P30825 629 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 PRKAR1BP31321 381 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 HTR3AP46098 478 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 P2RY4P51582 365 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 POLR2HP52434 150 aaKnown RBP13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 CRYBA2P53672 197 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 PDK3Q15120 406 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 ZSWIM7Q19AV6 140 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 GLIPR1L2Q4G1C9 344 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 DHRS4L2Q6PKH6 230 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 DHDDSQ86SQ9 333 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 MTDHQ86UE4 582 aaKnown RBP13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 TMEM200AQ86VY9 491 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 SLC43A2Q8N370 569 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 NFKBIDQ8NI38 313 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 C10orf82Q8WW14 230 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 C3orf49Q96BT1 292 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 CGREF1Q99674 301 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 PRRG4Q9BZD6 226 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 KAT8Q9H7Z6 458 aaKnown RBP13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 TRIM33Q9UPN9 1127 aa13.14□□□□□ -0.31
RPUSD1-204ENST00000563560 IFT52Q9Y366 437 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms