RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 ING1Q9UK53 422 aaPredicted RBP16.94■□□□□ 0.3
TRADD-203ENST00000563348 EDARQ9UNE0 448 aa16.94■□□□□ 0.3
TRADD-203ENST00000563348 HDGFL3Q9Y3E1 203 aa16.94■□□□□ 0.3
TRADD-203ENST00000563348 MAP1AP78559 2803 aaPredicted RBP16.93■□□□□ 0.3
TRADD-203ENST00000563348 TRBV5-3A0A0A0MS03 114 aa16.93■□□□□ 0.3
TRADD-203ENST00000563348 SMAD9O15198 467 aaKnown RBP16.93■□□□□ 0.3
TRADD-203ENST00000563348 CYTIPO60759 359 aa16.93■□□□□ 0.3
TRADD-203ENST00000563348 THBS1P07996 1170 aa16.93■□□□□ 0.3
TRADD-203ENST00000563348 UQCRBP14927 111 aa16.93■□□□□ 0.3
TRADD-203ENST00000563348 PPIBP23284 216 aaKnown RBP16.93■□□□□ 0.3
TRADD-203ENST00000563348 ACAA2P42765 397 aaKnown RBP16.93■□□□□ 0.3
TRADD-203ENST00000563348 POLR2HP52434 150 aaKnown RBP16.93■□□□□ 0.3
TRADD-203ENST00000563348 LARS2Q15031 903 aaKnown RBP16.93■□□□□ 0.3
TRADD-203ENST00000563348 RPS26P11Q5JNZ5 115 aaPredicted RBP16.93■□□□□ 0.3
TRADD-203ENST00000563348 RNF220Q5VTB9 566 aa16.93■□□□□ 0.3
TRADD-203ENST00000563348 STAC2Q6ZMT1 411 aa16.93■□□□□ 0.3
TRADD-203ENST00000563348 ZNF836Q6ZNA1 936 aa16.93■□□□□ 0.3
TRADD-203ENST00000563348 MTDHQ86UE4 582 aaKnown RBP16.93■□□□□ 0.3
TRADD-203ENST00000563348 CLIP4Q8N3C7 705 aa16.93■□□□□ 0.3
TRADD-203ENST00000563348 NINJ1Q92982 152 aa16.93■□□□□ 0.3
TRADD-203ENST00000563348 MAL2Q969L2 176 aa16.93■□□□□ 0.3
TRADD-203ENST00000563348 ADAM19Q9H013 955 aa16.93■□□□□ 0.3
TRADD-203ENST00000563348 ZNF385DQ9H6B1 395 aa16.93■□□□□ 0.3
TRADD-203ENST00000563348 PLEKHF2Q9H8W4 249 aa16.93■□□□□ 0.3
TRADD-203ENST00000563348 VAPAQ9P0L0 249 aa16.93■□□□□ 0.3
TRADD-203ENST00000563348 ST6GALNAC2Q9UJ37 374 aa16.93■□□□□ 0.3
TRADD-203ENST00000563348 OSGIN1Q9UJX0 560 aa16.93■□□□□ 0.3
TRADD-203ENST00000563348 TRIM33Q9UPN9 1127 aa16.93■□□□□ 0.3
TRADD-203ENST00000563348 ZNF443Q9Y2A4 671 aaPredicted RBP16.93■□□□□ 0.3
TRADD-203ENST00000563348 IFT52Q9Y366 437 aa16.93■□□□□ 0.3
TRADD-203ENST00000563348 FREM1Q5H8C1 2179 aa16.93■□□□□ 0.3
TRADD-203ENST00000563348 TMED7-TICAM2A0A0A6YYA0 188 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 PPP3CBP16298 524 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 KLK2P20151 261 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 CRYGSP22914 178 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 TACR3P29371 465 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 MAP2K6P52564 334 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 IST1P53990 364 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 RASGEF1BQ0VAM2 473 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 POU4F3Q15319 338 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 ANKRD34AQ69YU3 496 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 C22orf34Q6ZV56 151 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 ZNF550Q7Z398 422 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 ARL5BQ96KC2 179 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 PSD2Q9BQI7 771 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 SPATA9Q9BWV2 254 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 OR11A1Q9GZK7 315 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 ARMC7Q9H6L4 198 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 TRAPPC4Q9Y296 219 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 GPR52Q9Y2T5 361 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 TMED7Q9Y3B3 224 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 CHST2Q9Y4C5 530 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 PRRC2AP48634 2157 aaKnown RBP16.92■□□□□ 0.3
TRADD-203ENST00000563348 PRR14LQ5THK1 2151 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 ITPR3Q14573 2671 aa16.92■□□□□ 0.3
TRADD-203ENST00000563348 A0A0G2JND7 137 aa16.91■□□□□ 0.3
TRADD-203ENST00000563348 ZNF724A8MTY0 619 aa16.91■□□□□ 0.3
TRADD-203ENST00000563348 ZNF208O43345 1280 aa16.91■□□□□ 0.3
TRADD-203ENST00000563348 DNPH1O43598 174 aa16.91■□□□□ 0.3
TRADD-203ENST00000563348 PGM3O95394 542 aa16.91■□□□□ 0.3
TRADD-203ENST00000563348 PMS2P2O95744 297 aa16.91■□□□□ 0.3
TRADD-203ENST00000563348 FESP07332 822 aa16.91■□□□□ 0.3
TRADD-203ENST00000563348 GKN3PP0CG01 181 aa16.91■□□□□ 0.3
TRADD-203ENST00000563348 CCNA2P20248 432 aa16.91■□□□□ 0.3
TRADD-203ENST00000563348 PSMB1P20618 241 aaKnown RBP16.91■□□□□ 0.3
TRADD-203ENST00000563348 PDK3Q15120 406 aa16.91■□□□□ 0.3
TRADD-203ENST00000563348 METTL21CQ5VZV1 264 aa16.91■□□□□ 0.3
TRADD-203ENST00000563348 DLEU7Q6UYE1 221 aa16.91■□□□□ 0.3
TRADD-203ENST00000563348 TFAP2EQ6VUC0 442 aa16.91■□□□□ 0.3
TRADD-203ENST00000563348 BBS10Q8TAM1 723 aa16.91■□□□□ 0.3
TRADD-203ENST00000563348 CACYBPQ9HB71 228 aaKnown RBP16.91■□□□□ 0.3
TRADD-203ENST00000563348 LEF1Q9UJU2 399 aaPredicted RBP16.91■□□□□ 0.3
TRADD-203ENST00000563348 A0A1W2PPR1 153 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 TMEM72A0PK05 275 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 DEFB108AA8MXU0 73 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 EVPLLA8MZ36 301 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 C5orf58C9J3I9 102 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 SIAH2O43255 324 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 ARAFP10398 606 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 ETS2P15036 469 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 GPX2P18283 190 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 COPZ1P61923 177 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 ZNF311Q5JNZ3 666 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 GCNT6Q5T4J0 391 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 SPNS3Q6ZMD2 512 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 GABRG1Q8N1C3 465 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 C10orf111Q8N326 155 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 DPP10Q8N608 796 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 TSPEARQ8WU66 669 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 DDIT4LQ96D03 193 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 ZHX1-C8orf76Q96EF9 292 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 ZC3HAV1LQ96H79 300 aaKnown RBP16.9■□□□□ 0.3
TRADD-203ENST00000563348 HDHD5Q9BXW7 423 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 OR10A4Q9H209 315 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 IKZF5Q9H5V7 419 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 CCM2LQ9NUG4 571 aaPredicted RBP16.9■□□□□ 0.3
TRADD-203ENST00000563348 C6orf203Q9P0P8 240 aaPredicted RBP16.9■□□□□ 0.3
TRADD-203ENST00000563348 TMEM181Q9P2C4 612 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 PLEKHA6Q9Y2H5 1048 aa16.9■□□□□ 0.3
TRADD-203ENST00000563348 NDUFAF1Q9Y375 327 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms