RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 MAMDC2Q7Z304 686 aaPredicted RBP5.55□□□□□ -1.52
CNOT1-204ENST00000563130 GRINAQ7Z429 371 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 ADGRG3Q86Y34 549 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 CCDC71Q8IV32 467 aaPredicted RBP5.55□□□□□ -1.52
CNOT1-204ENST00000563130 LIX1LQ8IVB5 337 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 SLC15A3Q8IY34 581 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 ZNF440Q8IYI8 595 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 C9orf106Q8NAJ2 232 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 ACBD4Q8NC06 268 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 ASB5Q8WWX0 329 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 CMTM5Q96DZ9 223 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 REXO5Q96IC2 774 aaKnown RBP5.55□□□□□ -1.52
CNOT1-204ENST00000563130 ZNF845Q96IR2 970 aaPredicted RBP5.55□□□□□ -1.52
CNOT1-204ENST00000563130 DMRTB1Q96MA1 342 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 ZFP3Q96NJ6 502 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 LRRC37BQ96QE4 947 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 CITED4Q96RK1 184 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 TRIB1Q96RU8 372 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 SPATA5L1Q9BVQ7 753 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 ADAM19Q9H013 955 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 COQ10BQ9H8M1 238 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 EFCAB1Q9HAE3 211 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 CMTM6Q9NX76 183 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 COQ3Q9NZJ6 369 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 PLEKHB1Q9UF11 243 aaPredicted RBP5.55□□□□□ -1.52
CNOT1-204ENST00000563130 ANGPT4Q9Y264 503 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 ZNF175Q9Y473 711 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 ASH1LQ9NR48 2969 aaKnown RBP5.55□□□□□ -1.52
CNOT1-204ENST00000563130 ARHGAP21Q5T5U3 1957 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 HSPB2A8KAH6 182 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 J3QW42 95 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 M0QX08 132 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 EIF1AYO14602 144 aaKnown RBP5.55□□□□□ -1.52
CNOT1-204ENST00000563130 AIM2O14862 343 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 SERPINB7O75635 380 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 GKN3PP0CG01 181 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 PRG2P13727 222 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 ME2P23368 584 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 AQP1P29972 269 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 APOBEC1P41238 236 aaKnown RBP5.55□□□□□ -1.52
CNOT1-204ENST00000563130 SLC1A3P43003 542 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 HTR3AP46098 478 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 IDH2P48735 452 aaKnown RBP5.55□□□□□ -1.52
CNOT1-204ENST00000563130 MAP2K6P52564 334 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 RPS3AP61247 264 aaKnown RBP5.55□□□□□ -1.52
CNOT1-204ENST00000563130 TFF3Q07654 80 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 VEZF1Q14119 521 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 GUSBP1Q15486 140 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 HSPB2Q16082 182 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 DUSP7Q16829 419 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 GLIPR1L2Q4G1C9 344 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 C3orf33Q6P1S2 294 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 CCDC80Q76M96 950 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 ZNF550Q7Z398 422 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 ARPINQ7Z6K5 226 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 KRT73Q86Y46 540 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 SLC30A8Q8IWU4 369 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 BHLHE22Q8NFJ8 381 aaPredicted RBP5.55□□□□□ -1.52
CNOT1-204ENST00000563130 OR10D3Q8NH80 312 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 FNDC9Q8TBE3 224 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 FIG4Q92562 907 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 KLHL15Q96M94 604 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 ZNF607Q96SK3 696 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 TM9SF2Q99805 663 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 HOPXQ9BPY8 73 aaPredicted RBP5.55□□□□□ -1.52
CNOT1-204ENST00000563130 ECSITQ9BQ95 431 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 PINK1Q9BXM7 581 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 ARMC7Q9H6L4 198 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 TMEM185BQ9H7F4 350 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 RNF122Q9H9V4 155 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 PAQR5Q9NXK6 330 aaPredicted RBP5.55□□□□□ -1.52
CNOT1-204ENST00000563130 ABCD2Q9UBJ2 740 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 ZNF629Q9UEG4 869 aaPredicted RBP5.55□□□□□ -1.52
CNOT1-204ENST00000563130 OSGIN1Q9UJX0 560 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 FBXO9Q9UK97 447 aaPredicted RBP5.55□□□□□ -1.52
CNOT1-204ENST00000563130 NBPF19A0A087WUL8 3843 aa5.55□□□□□ -1.52
CNOT1-204ENST00000563130 A1L4Q6 167 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 PRORSD1PA6NEY8 169 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 SLC22A20A6NK97 555 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 GJE1A6NN92 205 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 NME4O00746 187 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 TPST2O60704 377 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 DCTN3O75935 186 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 AQP8O94778 261 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 IL18BPO95998 194 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 OPN1LWP04000 364 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 FKBP2P26885 142 aaKnown RBP5.54□□□□□ -1.52
CNOT1-204ENST00000563130 COL8A1P27658 744 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 KCNJ5P48544 419 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 MERTKQ12866 999 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 FOXF2Q12947 444 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 PON3Q15166 354 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 TMEM176BQ3YBM2 270 aaPredicted RBP5.54□□□□□ -1.52
CNOT1-204ENST00000563130 SYT14P1Q58G82 188 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 INTS11Q5TA45 600 aaKnown RBP5.54□□□□□ -1.52
CNOT1-204ENST00000563130 GKAP1Q5VSY0 366 aaPredicted RBP5.54□□□□□ -1.52
CNOT1-204ENST00000563130 ERICH5Q6P6B1 374 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 PATL1Q86TB9 770 aaKnown RBP5.54□□□□□ -1.52
CNOT1-204ENST00000563130 ARMC8Q8IUR7 673 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 FITM2Q8N6M3 262 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms