RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 TWIST2Q8WVJ9 160 aa13.82□□□□□ -0.2
HERPUD1-205ENST00000562914 PIMREGQ9BSJ6 248 aa13.82□□□□□ -0.2
HERPUD1-205ENST00000562914 EXD2Q9NVH0 621 aa13.82□□□□□ -0.2
HERPUD1-205ENST00000562914 CHRNA9Q9UGM1 479 aa13.82□□□□□ -0.2
HERPUD1-205ENST00000562914 FBXO9Q9UK97 447 aaPredicted RBP13.82□□□□□ -0.2
HERPUD1-205ENST00000562914 TRAPPC4Q9Y296 219 aa13.82□□□□□ -0.2
HERPUD1-205ENST00000562914 SLC35A3Q9Y2D2 325 aa13.82□□□□□ -0.2
HERPUD1-205ENST00000562914 ATP23Q9Y6H3 246 aa13.82□□□□□ -0.2
HERPUD1-205ENST00000562914 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.82□□□□□ -0.2
HERPUD1-205ENST00000562914 PLCE1Q9P212 2302 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 VWC2LB2RUY7 222 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 PDLIM1O00151 329 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 EIF1BO60739 113 aaKnown RBP13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 CYP7B1O75881 506 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 C6orf47O95873 294 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 WNT11O96014 354 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 ITGA5P08648 1049 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 UBTFL6P0CB48 400 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 RNF144AP50876 292 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 MAP2K6P52564 334 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 GPR68Q15743 365 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 ARHGAP11BQ3KRB8 267 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 ATP6AP1LQ52LC2 224 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 FAM120AOSQ5T036 256 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 AP1ARQ63HQ0 302 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 GRINAQ7Z429 371 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 HTRA1Q92743 480 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 CCDC106Q9BWC9 280 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 GATA5Q9BWX5 397 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 ZNF350Q9GZX5 532 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 POLE3Q9NRF9 147 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 UPB1Q9UBR1 384 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 SLC9A8Q9Y2E8 581 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 TRAF6Q9Y4K3 522 aa13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 YLPM1P49750 1951 aaKnown RBP13.81□□□□□ -0.2
HERPUD1-205ENST00000562914 LOC100289279A0A1B0GTE1 492 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 LOC390937A0A1W2PQ73 354 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 PIP5K1BO14986 540 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 CFLARO15519 480 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 NPHS1O60500 1241 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 UGT2B17O75795 530 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 PGRP06401 933 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 APEHP13798 732 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 MATN1P21941 496 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 NR4A2P43354 598 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 HTR3AP46098 478 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 PRPS1P60891 318 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 SWI5Q1ZZU3 235 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 UGT3A2Q3SY77 523 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 XKR7Q5GH72 579 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 C10orf107Q8IVU9 208 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 FAM71CQ8NEG0 241 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 OR5D16Q8NGK9 328 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 ZNF563Q8TA94 476 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 BOD1Q96IK1 185 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 OBP2BQ9NPH6 170 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 EXOSC3Q9NQT5 275 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 SLC17A5Q9NRA2 495 aa13.8□□□□□ -0.2
HERPUD1-205ENST00000562914 A0A1W2PR80 420 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 PGM1P36871 562 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 SNRPD2P62316 118 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 HBA1P69905 142 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 H3F3AP84243 136 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 GGTLC2Q14390 218 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 PTGR1Q14914 329 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 PCLAFQ15004 111 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 ATAD3BQ5T9A4 648 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 KLHL24Q6TFL4 600 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 CASP12Q6UXS9 341 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 C16orf62Q7Z3J2 963 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 ARIH2OSQ8N7S6 290 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 WDR31Q8NA23 367 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 MIPOL1Q8TD10 442 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 PMM1Q92871 262 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 MSI2Q96DH6 328 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 C16orf45Q96MC5 204 aaPredicted RBP13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 NAA11Q9BSU3 229 aaPredicted RBP13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 DUSP26Q9BV47 211 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 TXLNGYQ9BZA5 131 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 CHODLQ9H9P2 273 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 MOV10Q9HCE1 1003 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 CTPS2Q9NRF8 586 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 TMEM181Q9P2C4 612 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 KCNE5Q9UJ90 142 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 MKLN1Q9UL63 735 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 PCDHGB4Q9UN71 923 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 ALPK2Q86TB3 2170 aa13.79□□□□□ -0.2
HERPUD1-205ENST00000562914 KIAA0513O60268 411 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 FCMRO60667 390 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 PEX11AO75192 247 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 PDE5AO76074 875 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 KRT4P19013 534 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 MPGP29372 298 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 SOAT1P35610 550 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 SERPINB5P36952 375 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 SLC35A1P78382 337 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 MAD2L1Q13257 205 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 FAM153CQ494X1 144 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 C6orf136Q5SQH8 315 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 C6orf120Q7Z4R8 191 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms