RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 CCNYL2Q5T2Q4 361 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 NDUFAF5Q5TEU4 345 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 NOXRED1Q6NXP6 359 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 H3F3CQ6NXT2 135 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 SLC48A1Q6P1K1 146 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 FOXL2NBQ6ZUU3 175 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 SHFQ7M4L6 423 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 CPEB2Q7Z5Q1 589 aaKnown RBP4.15□□□□□ -1.75
SMG1-206ENST00000562668 OR4N5Q8IXE1 308 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 RIMKLAQ8IXN7 391 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 ZNF595Q8IYB9 648 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 PRSS58Q8IYP2 241 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 LRRC34Q8IZ02 419 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 ZNF321PQ8N8H1 164 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 APCDD1LQ8NCL9 501 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 DNAAF1Q8NEP3 725 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 FAM76AQ8TAV0 307 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 AGR3Q8TD06 166 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 C16orf78Q8WTQ4 265 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 PTPMT1Q8WUK0 201 aaPredicted RBP4.15□□□□□ -1.75
SMG1-206ENST00000562668 KIAA1143Q96AT1 154 aaPredicted RBP4.15□□□□□ -1.75
SMG1-206ENST00000562668 OTULINQ96BN8 352 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 SDCCAG3Q96C92 435 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 C19orf60Q96EN9 201 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 CNRIP1Q96F85 164 aaPredicted RBP4.15□□□□□ -1.75
SMG1-206ENST00000562668 OR52B2Q96RD2 323 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 PAIP2Q9BPZ3 127 aaKnown RBP4.15□□□□□ -1.75
SMG1-206ENST00000562668 EBPLQ9BY08 206 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 TRIM4Q9C037 500 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 ILKAPQ9H0C8 392 aaPredicted RBP4.15□□□□□ -1.75
SMG1-206ENST00000562668 RPF2Q9H7B2 306 aaKnown RBP4.15□□□□□ -1.75
SMG1-206ENST00000562668 MEAF6Q9HAF1 191 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 KCNK13Q9HB14 408 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 LRTM1Q9HBL6 345 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 MYNNQ9NPC7 610 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 MED4Q9NPJ6 270 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 PRTFDC1Q9NRG1 225 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 INTS9Q9NV88 658 aaKnown RBP4.15□□□□□ -1.75
SMG1-206ENST00000562668 C1orf109Q9NX04 203 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 LYARQ9NX58 379 aaKnown RBP4.15□□□□□ -1.75
SMG1-206ENST00000562668 TAS2R7Q9NYW3 318 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 TAGLN3Q9UI15 199 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 ZNF639Q9UID6 485 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 FBXW2Q9UKT8 454 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 ERVK-11Q9UQG0 969 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 PADI2Q9Y2J8 665 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 FIS1Q9Y3D6 152 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 ADAM18Q9Y3Q7 739 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 MMACHCQ9Y4U1 282 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 POLR3HQ9Y535 204 aaPredicted RBP4.15□□□□□ -1.75
SMG1-206ENST00000562668 TPRP12270 2363 aaKnown RBP4.14□□□□□ -1.75
SMG1-206ENST00000562668 NOTCH3Q9UM47 2321 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 ARHGAP10A1A4S6 786 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 C1orf226A1L170 272 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 SAGE2PA6NJ88 616 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 ARGFXA6NJG6 315 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 GLOD5A6NK44 160 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 MYO1GB0I1T2 1018 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 WNT9BO14905 357 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 HDAC3O15379 428 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 PRKNO60260 465 aaPredicted RBP4.14□□□□□ -1.75
SMG1-206ENST00000562668 EDF1O60869 148 aaKnown RBP4.14□□□□□ -1.75
SMG1-206ENST00000562668 SCN2BO60939 215 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 PEX11AO75192 247 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 SEC22BO75396 215 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 GPR75O95800 540 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 HPP00738 406 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 IGKV3-11P04433 115 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 HEXBP07686 556 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 ANXA4P09525 319 aaPredicted RBP4.14□□□□□ -1.75
SMG1-206ENST00000562668 CT62P0C5K7 136 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 C8orf89P0DMQ9 161 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 NEFHP12036 1026 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 CD1EP15812 388 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 ZNF10P21506 573 aaPredicted RBP4.14□□□□□ -1.75
SMG1-206ENST00000562668 JAK1P23458 1154 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 MDH1P40925 334 aaKnown RBP4.14□□□□□ -1.75
SMG1-206ENST00000562668 FRKP42685 505 aaPredicted RBP4.14□□□□□ -1.75
SMG1-206ENST00000562668 MAPK12P53778 367 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 DIO3P55073 304 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 SLC26A5P58743 744 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 RPL38P63173 70 aaKnown RBP4.14□□□□□ -1.75
SMG1-206ENST00000562668 SKP1P63208 163 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 FOLH1Q04609 750 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 EMX2Q04743 252 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 ZNF763Q0D2J5 394 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 NSDHLQ15738 373 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 DEFB109BQ30KR1 87 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 SLC9B1Q4ZJI4 515 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 SFT2D3Q587I9 215 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 FHL5Q5TD97 284 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 ATG16L1Q676U5 607 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 ACSM2BQ68CK6 577 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 FAAH2Q6GMR7 532 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 OR52E8Q6IFG1 317 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 JMJD6Q6NYC1 403 aaPredicted RBP4.14□□□□□ -1.75
SMG1-206ENST00000562668 CYP20A1Q6UW02 462 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 EPGNQ6UW88 154 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 IGFL2Q6UWQ7 119 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 NDUFAF7Q7L592 441 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms