RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 SLC6A19Q695T7 634 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 DMKNQ6E0U4 476 aaPredicted RBP6.91□□□□□ -1.3
CFDP1-202ENST00000562602 ULK3Q6PHR2 472 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 FAM111BQ6SJ93 734 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 ENPP7Q6UWV6 458 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 TMEM184AQ6ZMB5 413 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 DPY19L2P2Q6ZN68 376 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 RNF44Q7L0R7 432 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 NUP54Q7Z3B4 507 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 HDDC2Q7Z4H3 204 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 SLITRK4Q8IW52 837 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 FAM109AQ8N4B1 249 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 C12orf76Q8N812 135 aaPredicted RBP6.91□□□□□ -1.3
CFDP1-202ENST00000562602 SAMD12Q8N8I0 201 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 KCT2Q8NC54 265 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 ANGPTL6Q8NI99 470 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 BAHD1Q8TBE0 780 aaPredicted RBP6.91□□□□□ -1.3
CFDP1-202ENST00000562602 C17orf50Q8WW18 174 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 SMPDL3BQ92485 455 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 NACC2Q96BF6 587 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 CTHRC1Q96CG8 243 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 DMRTB1Q96MA1 342 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 MNTQ99583 582 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 MACROD1Q9BQ69 325 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 LMF2Q9BU23 707 aaKnown RBP6.91□□□□□ -1.3
CFDP1-202ENST00000562602 ZNF426Q9BUY5 554 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 DPH1Q9BZG8 443 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 ABCG5Q9H222 651 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 LRRN3Q9H3W5 708 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 SLC28A3Q9HAS3 691 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 IL21RQ9HBE5 538 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 ADAP2Q9NPF8 381 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 MCUBQ9NWR8 336 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 ZNF624Q9P2J8 865 aaPredicted RBP6.91□□□□□ -1.3
CFDP1-202ENST00000562602 TBC1D29Q9UFV1 150 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 SLC6A5Q9Y345 797 aa6.91□□□□□ -1.3
CFDP1-202ENST00000562602 COL4A3Q01955 1670 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 COL6A3P12111 3177 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 KIAA1549LQ6ZVL6 1849 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 C2orf92A0A1B0GVN3 265 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 C7orf66A4D0T2 115 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 HSPB2A8KAH6 182 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 A8MU76 341 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 J3QLW9 94 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 BTN3A3O00478 584 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 CYR61O00622 381 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 IMPA2O14732 288 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 ARPC3O15145 178 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 PIP5K1CO60331 668 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 OR10H2O60403 315 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 GALR3O60755 368 aaPredicted RBP6.9□□□□□ -1.3
CFDP1-202ENST00000562602 FZD7O75084 574 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 RFPL3O75679 317 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 OR2B3O76000 313 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 ZNF432O94892 652 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 TNFP01375 233 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 PNMTP11086 282 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 CHRNB1P11230 501 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 APEHP13798 732 aaKnown RBP6.9□□□□□ -1.3
CFDP1-202ENST00000562602 ZNF19P17023 458 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 MAKP20794 623 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 HNRNPA2B1P22626 353 aaKnown RBP6.9□□□□□ -1.3
CFDP1-202ENST00000562602 MAPK3P27361 379 aaPredicted RBP6.9□□□□□ -1.3
CFDP1-202ENST00000562602 HTR2AP28223 471 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 LCN1P31025 176 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 GDI1P31150 447 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 GABRA3P34903 492 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 RCVRNP35243 200 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 SOX18P35713 384 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 ACTR1BP42025 376 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 SLC16A1P53985 500 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 ACTR1AP61163 376 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 SIM1P81133 766 aaPredicted RBP6.9□□□□□ -1.3
CFDP1-202ENST00000562602 MRPS21P82921 87 aaKnown RBP6.9□□□□□ -1.3
CFDP1-202ENST00000562602 IKZF1Q13422 519 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 GPR176Q14439 515 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 ZNF141Q15928 474 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 HSPB2Q16082 182 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 NTRK2Q16620 822 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 PRICKLE4Q2TBC4 344 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 C2orf27AQ580R0 203 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 VASNQ6EMK4 673 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 ARMC6Q6NXE6 501 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 ARL9Q6T311 187 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 SHFQ7M4L6 423 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 OLIG3Q7RTU3 272 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 FGD2Q7Z6J4 655 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 TOMM5Q8N4H5 51 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 ZFP41Q8N8Y5 198 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 BBS1Q8NFJ9 593 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 OR7G1Q8NGA0 311 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 FLVCR1-AS1Q8TAF5 88 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 TRMT10AQ8TBZ6 339 aaKnown RBP6.9□□□□□ -1.3
CFDP1-202ENST00000562602 OR1E3Q8WZA6 343 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 KLK6Q92876 244 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 PTP4A1Q93096 173 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 KISS1RQ969F8 398 aaPredicted RBP6.9□□□□□ -1.3
CFDP1-202ENST00000562602 SMIM19Q96E16 107 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 SGTBQ96EQ0 304 aa6.9□□□□□ -1.3
CFDP1-202ENST00000562602 SIPA1Q96FS4 1042 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms