RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 SPATA9Q9BWV2 254 aa17.24■□□□□ 0.35
TMEM249-202ENST00000562477 PLSCR4Q9NRQ2 329 aa17.24■□□□□ 0.35
TMEM249-202ENST00000562477 ING1Q9UK53 422 aaPredicted RBP17.24■□□□□ 0.35
TMEM249-202ENST00000562477 TMED7Q9Y3B3 224 aa17.24■□□□□ 0.35
TMEM249-202ENST00000562477 HRNRQ86YZ3 2850 aaPredicted RBP17.23■□□□□ 0.35
TMEM249-202ENST00000562477 FAAHO00519 579 aa17.23■□□□□ 0.35
TMEM249-202ENST00000562477 FBP2O00757 339 aa17.23■□□□□ 0.35
TMEM249-202ENST00000562477 FESP07332 822 aa17.23■□□□□ 0.35
TMEM249-202ENST00000562477 PABPC4LP0CB38 370 aaKnown RBP17.23■□□□□ 0.35
TMEM249-202ENST00000562477 POU2F1P14859 743 aa17.23■□□□□ 0.35
TMEM249-202ENST00000562477 GPX2P18283 190 aa17.23■□□□□ 0.35
TMEM249-202ENST00000562477 MDH1P40925 334 aaKnown RBP17.23■□□□□ 0.35
TMEM249-202ENST00000562477 SLC1A3P43003 542 aa17.23■□□□□ 0.35
TMEM249-202ENST00000562477 KCNJ5P48544 419 aa17.23■□□□□ 0.35
TMEM249-202ENST00000562477 POLR2HP52434 150 aaKnown RBP17.23■□□□□ 0.35
TMEM249-202ENST00000562477 MTPNP58546 118 aa17.23■□□□□ 0.35
TMEM249-202ENST00000562477 CDK6Q00534 326 aa17.23■□□□□ 0.35
TMEM249-202ENST00000562477 NFYCQ13952 458 aa17.23■□□□□ 0.35
TMEM249-202ENST00000562477 CAPRIN1Q14444 709 aaKnown RBP17.23■□□□□ 0.35
TMEM249-202ENST00000562477 ZNF311Q5JNZ3 666 aa17.23■□□□□ 0.35
TMEM249-202ENST00000562477 SERPINA11Q86U17 422 aa17.23■□□□□ 0.35
TMEM249-202ENST00000562477 ZNF440Q8IYI8 595 aa17.23■□□□□ 0.35
TMEM249-202ENST00000562477 ZNF775Q96BV0 537 aaPredicted RBP17.23■□□□□ 0.35
TMEM249-202ENST00000562477 GLRX2Q9NS18 164 aa17.23■□□□□ 0.35
TMEM249-202ENST00000562477 RASSF1Q9NS23 344 aa17.23■□□□□ 0.35
TMEM249-202ENST00000562477 KLHL13Q9P2N7 655 aa17.23■□□□□ 0.35
TMEM249-202ENST00000562477 ZNF232Q9UNY5 417 aa17.23■□□□□ 0.35
TMEM249-202ENST00000562477 TESMINQ9Y4I5 508 aa17.23■□□□□ 0.35
TMEM249-202ENST00000562477 OTOGQ6ZRI0 2925 aa17.23■□□□□ 0.35
TMEM249-202ENST00000562477 ZC3H12DA2A288 527 aaKnown RBP17.22■□□□□ 0.35
TMEM249-202ENST00000562477 FAM221AA4D161 298 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 EVPLLA8MZ36 301 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 SULT2B1O00204 365 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 PRKD3O94806 890 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 AQP1P29972 269 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 UGT2B10P36537 528 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 SCARB2Q14108 478 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 DAZAP2Q15038 168 aaPredicted RBP17.22■□□□□ 0.35
TMEM249-202ENST00000562477 RNPS1Q15287 305 aaKnown RBP17.22■□□□□ 0.35
TMEM249-202ENST00000562477 ANKRD34AQ69YU3 496 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 GTF2IRD2BQ6EKJ0 949 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 REEP3Q6NUK4 255 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 ZNF550Q7Z398 422 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 CDH24Q86UP0 819 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 GTF2IRD2Q86UP8 949 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 PTOV1Q86YD1 416 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 CADM2Q8N3J6 435 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 ANKRD27Q96NW4 1050 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 DACH2Q96NX9 599 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 WFIKKN1Q96NZ8 548 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 ZNF317Q96PQ6 595 aaPredicted RBP17.22■□□□□ 0.35
TMEM249-202ENST00000562477 ZNF300Q96RE9 604 aaPredicted RBP17.22■□□□□ 0.35
TMEM249-202ENST00000562477 SLC39A3Q9BRY0 314 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 POLDIP3Q9BY77 421 aaKnown RBP17.22■□□□□ 0.35
TMEM249-202ENST00000562477 KLHL4Q9C0H6 718 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 ADAM19Q9H013 955 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 CACYBPQ9HB71 228 aaKnown RBP17.22■□□□□ 0.35
TMEM249-202ENST00000562477 SAR1AQ9NR31 198 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 KLHL28Q9NXS3 571 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 IFT52Q9Y366 437 aa17.22■□□□□ 0.35
TMEM249-202ENST00000562477 SPIN1Q9Y657 262 aaPredicted RBP17.22■□□□□ 0.35
TMEM249-202ENST00000562477 ZNF814B7Z6K7 855 aa17.21■□□□□ 0.35
TMEM249-202ENST00000562477 CYTIPO60759 359 aa17.21■□□□□ 0.35
TMEM249-202ENST00000562477 ETS2P15036 469 aa17.21■□□□□ 0.35
TMEM249-202ENST00000562477 EDNRAP25101 427 aa17.21■□□□□ 0.35
TMEM249-202ENST00000562477 HTR3AP46098 478 aa17.21■□□□□ 0.35
TMEM249-202ENST00000562477 KLF10Q13118 480 aa17.21■□□□□ 0.35
TMEM249-202ENST00000562477 POU4F3Q15319 338 aa17.21■□□□□ 0.35
TMEM249-202ENST00000562477 GLIPR1L2Q4G1C9 344 aa17.21■□□□□ 0.35
TMEM249-202ENST00000562477 TMEM201Q5SNT2 666 aa17.21■□□□□ 0.35
TMEM249-202ENST00000562477 C22orf34Q6ZV56 151 aa17.21■□□□□ 0.35
TMEM249-202ENST00000562477 TSPEARQ8WU66 669 aa17.21■□□□□ 0.35
TMEM249-202ENST00000562477 C10orf82Q8WW14 230 aa17.21■□□□□ 0.35
TMEM249-202ENST00000562477 PSD2Q9BQI7 771 aa17.21■□□□□ 0.35
TMEM249-202ENST00000562477 CLEC4MQ9H2X3 399 aaPredicted RBP17.21■□□□□ 0.35
TMEM249-202ENST00000562477 TMEM38AQ9H6F2 299 aa17.21■□□□□ 0.35
TMEM249-202ENST00000562477 ELOVL5Q9NYP7 299 aa17.21■□□□□ 0.35
TMEM249-202ENST00000562477 CORO2BQ9UQ03 480 aa17.21■□□□□ 0.35
TMEM249-202ENST00000562477 ROS1P08922 2347 aa17.2■□□□□ 0.34
TMEM249-202ENST00000562477 C16orf97H3BN30 126 aa17.2■□□□□ 0.34
TMEM249-202ENST00000562477 ATP8B1O43520 1251 aa17.2■□□□□ 0.34
TMEM249-202ENST00000562477 TPST1O60507 370 aa17.2■□□□□ 0.34
TMEM249-202ENST00000562477 RAMP1O60894 148 aa17.2■□□□□ 0.34
TMEM249-202ENST00000562477 IMPDH2P12268 514 aa17.2■□□□□ 0.34
TMEM249-202ENST00000562477 UQCRBP14927 111 aa17.2■□□□□ 0.34
TMEM249-202ENST00000562477 OR2B6P58173 313 aa17.2■□□□□ 0.34
TMEM249-202ENST00000562477 RASGEF1BQ0VAM2 473 aa17.2■□□□□ 0.34
TMEM249-202ENST00000562477 BNIP2Q12982 314 aa17.2■□□□□ 0.34
TMEM249-202ENST00000562477 ABLIM2Q6H8Q1 611 aa17.2■□□□□ 0.34
TMEM249-202ENST00000562477 TFAP2EQ6VUC0 442 aa17.2■□□□□ 0.34
TMEM249-202ENST00000562477 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.2■□□□□ 0.34
TMEM249-202ENST00000562477 SLC43A2Q8N370 569 aa17.2■□□□□ 0.34
TMEM249-202ENST00000562477 LIME1Q9H400 295 aa17.2■□□□□ 0.34
TMEM249-202ENST00000562477 ITGB1BP2Q9UKP3 347 aa17.2■□□□□ 0.34
TMEM249-202ENST00000562477 HDGFL3Q9Y3E1 203 aa17.2■□□□□ 0.34
TMEM249-202ENST00000562477 SIAH2O43255 324 aa17.19■□□□□ 0.34
TMEM249-202ENST00000562477 PMS2P2O95744 297 aa17.19■□□□□ 0.34
TMEM249-202ENST00000562477 YES1P07947 543 aa17.19■□□□□ 0.34
TMEM249-202ENST00000562477 SLC6A2P23975 617 aa17.19■□□□□ 0.34
TMEM249-202ENST00000562477 PCYT1AP49585 367 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms