RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 POLDIP3Q9BY77 421 aaKnown RBP5.98□□□□□ -1.45
CAPN3-210ENST00000561817 TRIM2Q9C040 744 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 NRSN2Q9GZP1 204 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 HOXD1Q9GZZ0 328 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 ADNPQ9H2P0 1102 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 WDR54Q9H977 334 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 POLR1BQ9H9Y6 1135 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 CACYBPQ9HB71 228 aaKnown RBP5.98□□□□□ -1.45
CAPN3-210ENST00000561817 MEPEQ9NQ76 525 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-210ENST00000561817 EXOSC3Q9NQT5 275 aaKnown RBP5.98□□□□□ -1.45
CAPN3-210ENST00000561817 UBQLN4Q9NRR5 601 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 C20orf141Q9NUB4 165 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 IL20Q9NYY1 176 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 CNIH4Q9P003 139 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 BLOC1S6Q9UL45 172 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 ICAM5Q9UMF0 924 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 OR10H1Q9Y4A9 318 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 RIF1Q5UIP0 2472 aaKnown RBP5.97□□□□□ -1.45
CAPN3-210ENST00000561817 IGKV1D-42A0A075B6H8 117 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 A0A1W2PQ72 361 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 A0A1W2PQD3 144 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 PMS2P1A4D2B8 440 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 SH3D21A4FU49 640 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 CLCA1A8K7I4 914 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 B4DXG7 233 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 PTGES3LE9PB15 166 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 SLC30A4O14863 429 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 CHP2O43745 196 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 PRKYO43930 277 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 FAM20BO75063 409 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 ICOSLGO75144 302 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 TMEM127O75204 238 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 ENTPD6O75354 484 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 KLF7O75840 302 aaPredicted RBP5.97□□□□□ -1.45
CAPN3-210ENST00000561817 CDK1P06493 297 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 HEXBP07686 556 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 CELA3AP09093 270 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 DCKP27707 260 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 POU1F1P28069 291 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 ABCD3P28288 659 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 GRNP28799 593 aaKnown RBP5.97□□□□□ -1.45
CAPN3-210ENST00000561817 SLC5A2P31639 672 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 ATP6V1E1P36543 226 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 IFNGR2P38484 337 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 RBM34P42696 430 aaKnown RBP5.97□□□□□ -1.45
CAPN3-210ENST00000561817 MAP2K4P45985 399 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 GPR4P46093 362 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 RFX3P48380 749 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 IDH2P48735 452 aaKnown RBP5.97□□□□□ -1.45
CAPN3-210ENST00000561817 NR0B1P51843 470 aaKnown RBP5.97□□□□□ -1.45
CAPN3-210ENST00000561817 GP2P55259 537 aaKnown RBP5.97□□□□□ -1.45
CAPN3-210ENST00000561817 RNF4P78317 190 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 MVKQ03426 396 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 EMX1Q04741 257 aaPredicted RBP5.97□□□□□ -1.45
CAPN3-210ENST00000561817 GINS1Q14691 196 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 ZNF620Q6ZNG0 422 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 PRSS48Q7RTY5 328 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 ZNF550Q7Z398 422 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 CPEB2Q7Z5Q1 589 aaKnown RBP5.97□□□□□ -1.45
CAPN3-210ENST00000561817 WFDC8Q8IUA0 241 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 ZNF440Q8IYI8 595 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 PRR22Q8IZ63 422 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 OR8K3Q8NH51 312 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 PFN4Q8NHR9 129 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 NUBPLQ8TB37 319 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 BRIX1Q8TDN6 353 aaKnown RBP5.97□□□□□ -1.45
CAPN3-210ENST00000561817 TMEM239Q8WW34 195 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 GIMAP1Q8WWP7 306 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 GATAD2BQ8WXI9 593 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 TTC9Q92623 222 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 C3orf49Q96BT1 292 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 NTNG2Q96CW9 530 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 OMA1Q96E52 524 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 RADILQ96JH8 1075 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 SSBP4Q9BWG4 385 aaPredicted RBP5.97□□□□□ -1.45
CAPN3-210ENST00000561817 LAT2Q9GZY6 243 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 LHPPQ9H008 270 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 ENKD1Q9H0I2 346 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 ARMC7Q9H6L4 198 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 EGLN3Q9H6Z9 239 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 TMEM27Q9HBJ8 222 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 RABL2AQ9UBK7 228 aaPredicted RBP5.97□□□□□ -1.45
CAPN3-210ENST00000561817 SLC35A3Q9Y2D2 325 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 TPRKBQ9Y3C4 175 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 CDH10Q9Y6N8 788 aa5.97□□□□□ -1.45
CAPN3-210ENST00000561817 PCSK5Q92824 1860 aa5.96□□□□□ -1.45
CAPN3-210ENST00000561817 PCNX3Q9H6A9 2034 aa5.96□□□□□ -1.45
CAPN3-210ENST00000561817 GVINP1Q7Z2Y8 2422 aa5.96□□□□□ -1.45
CAPN3-210ENST00000561817 A0A087WUJ7 227 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 UNC119BA6NIH7 251 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 OR6C70A6NIJ9 312 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 C17orf51A8MQB3 221 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 KDM4EB2RXH2 506 aaPredicted RBP5.96□□□□□ -1.46
CAPN3-210ENST00000561817 ZNF701M0R085 212 aaPredicted RBP5.96□□□□□ -1.46
CAPN3-210ENST00000561817 RGS10O43665 173 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 AHCYL1O43865 530 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 MPZL2O60487 215 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 WISP1O95388 367 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 DLGAP3O95886 979 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 CSTAP01040 98 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms