RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 C1QCP02747 245 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 CRHP06850 196 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 HSD17B1P14061 328 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 CD1EP15812 388 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 NCK1P16333 377 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 HOXB9P17482 250 aaPredicted RBP9.65□□□□□ -0.86
TPM1-229ENST00000561242 GGT1P19440 569 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 AGAP20933 346 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 IFNGR2P38484 337 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 PEX19P40855 299 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 ARHGDIAP52565 204 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 DMTNQ08495 405 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 TOMM34Q15785 309 aaPredicted RBP9.65□□□□□ -0.86
TPM1-229ENST00000561242 DUSP7Q16829 419 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 SLC25A53Q5H9E4 307 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 SWT1Q5T5J6 900 aaKnown RBP9.65□□□□□ -0.86
TPM1-229ENST00000561242 TMPPEQ6ZT21 453 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 KIF18BQ86Y91 864 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 ZNF100Q8IYN0 542 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 PIGXQ8TBF5 258 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 STK35Q8TDR2 534 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 INTS12Q96CB8 462 aaKnown RBP9.65□□□□□ -0.86
TPM1-229ENST00000561242 SFXN3Q9BWM7 321 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 POTEKPQ9BYX7 375 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 PIGMQ9H3S5 423 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 PARPBPQ9NWS1 579 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 ZNF629Q9UEG4 869 aaPredicted RBP9.65□□□□□ -0.86
TPM1-229ENST00000561242 OSGIN1Q9UJX0 560 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 PROCRQ9UNN8 238 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 TRAPPC4Q9Y296 219 aa9.65□□□□□ -0.86
TPM1-229ENST00000561242 SPEGQ15772 3267 aa9.65□□□□□ -0.87
TPM1-229ENST00000561242 CENPVL1A0A0U1RR11 272 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 A0A1B0GWA3 101 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 FAM90A27PA6NNH2 459 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 CASKO14936 926 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 ZNHIT1O43257 154 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 OIP5O43482 229 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 FRS3O43559 492 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 DNPH1O43598 174 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 ZG16O60844 167 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 RCBTB2O95199 551 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 ZIC2O95409 532 aaPredicted RBP9.64□□□□□ -0.87
TPM1-229ENST00000561242 CLDN14O95500 239 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 GLI4P10075 376 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 BMP5P22003 454 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 RRM2P31350 389 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 DIO1P49895 249 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 CLDN18P56856 261 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 PCBP3P57721 371 aaKnown RBP9.64□□□□□ -0.87
TPM1-229ENST00000561242 SIRPAP78324 504 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 HOXC5Q00444 222 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 RASGEF1BQ0VAM2 473 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 OR7A5Q15622 319 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 SLC25A35Q3KQZ1 300 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 ENTPD8Q5MY95 495 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 C1orf140Q5VVS0 124 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 FBXW10Q5XX13 1052 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 RINLQ6ZS11 566 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 FCRLAQ7L513 359 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 SPATA24Q86W54 205 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 UBE2J2Q8N2K1 259 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 LSMEM1Q8N8F7 131 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 PIK3C3Q8NEB9 887 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 FAM71CQ8NEG0 241 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 TAMM41Q96BW9 452 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 CCDC124Q96CT7 223 aaKnown RBP9.64□□□□□ -0.87
TPM1-229ENST00000561242 SLC41A3Q96GZ6 507 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 CCDC120Q96HB5 630 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 PYURFQ96I23 114 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 GMPPAQ96IJ6 420 aaPredicted RBP9.64□□□□□ -0.87
TPM1-229ENST00000561242 ZNF845Q96IR2 970 aaPredicted RBP9.64□□□□□ -0.87
TPM1-229ENST00000561242 RSRC1Q96IZ7 334 aaKnown RBP9.64□□□□□ -0.87
TPM1-229ENST00000561242 RAB3IPQ96QF0 476 aaPredicted RBP9.64□□□□□ -0.87
TPM1-229ENST00000561242 ZNF347Q96SE7 839 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 GORASP2Q9H8Y8 452 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 ABCD2Q9UBJ2 740 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 FOXD3Q9UJU5 478 aaPredicted RBP9.64□□□□□ -0.87
TPM1-229ENST00000561242 MED31Q9Y3C7 131 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 MED13Q9UHV7 2174 aa9.64□□□□□ -0.87
TPM1-229ENST00000561242 PKD1L2Q7Z442 2459 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 TRAV36DV7A0A075B6V5 113 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 A0A1W2PNR3 127 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 TMEM72A0PK05 275 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 HTR3EA5X5Y0 456 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 C17orf51A8MQB3 221 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 PRSS44E7EML9 344 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 ADAMDEC1O15204 470 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 CHP2O43745 196 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 TPST1O60507 370 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 VAMP5O95183 116 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 OR5F1O95221 314 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 PMS2P2O95744 297 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 FABP3P05413 133 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 THRBP10828 461 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 PSMA4P25789 261 aaKnown RBP9.63□□□□□ -0.87
TPM1-229ENST00000561242 ACAA2P42765 397 aaKnown RBP9.63□□□□□ -0.87
TPM1-229ENST00000561242 OR1E2P47887 323 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 GZMMP51124 257 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 CLDN20P56880 219 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 B3GALT5-AS1P59052 145 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms