RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 C5orf58C9J3I9 102 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 WWP2O00308 870 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 HMGN4O00479 90 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 GABRPO00591 440 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 PRRG1O14668 218 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 SLC30A4O14863 429 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 RGS5O15539 181 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 NDUFS4O43181 175 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 PRKYO43930 277 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 SH3BP5O60239 455 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 OR10H3O60404 316 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 TMCC2O75069 709 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 ZNF780AO75290 641 aaPredicted RBP2.27□□□□□ -2.05
SPG11-223ENST00000560858 NME6O75414 186 aaPredicted RBP2.27□□□□□ -2.05
SPG11-223ENST00000560858 NDUFB8O95169 186 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 CDRT1O95170 752 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 NFATC1O95644 943 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 EPPINO95925 133 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 CTSLP07711 333 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 CHRM4P08173 479 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 LIMS3P0CW19 117 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 LIMS4P0CW20 117 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 OR12D1P0DN82 309 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 CHRNB1P11230 501 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 CKMT1AP12532 417 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 POU2F1P14859 743 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 NPPBP16860 134 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 MAGP20916 626 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 GSTM3P21266 225 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 CPN2P22792 545 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 MMP11P24347 488 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 MYL9P24844 172 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 ACADLP28330 430 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 GABRR2P28476 465 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 TACR3P29371 465 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 PDHA2P29803 388 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 PKLRP30613 574 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 BTCP35070 178 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 NUDT1P36639 197 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 FEN1P39748 380 aaKnown RBP2.27□□□□□ -2.05
SPG11-223ENST00000560858 ETV5P41161 510 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 SLC1A3P43003 542 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 TGM4P49221 684 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 KHKP50053 298 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 ETV1P50549 477 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 SMSP52788 366 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 RAB25P57735 213 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 TAS2R50P59544 299 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 ARPC4P59998 168 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 RRAS2P62070 204 aaPredicted RBP2.27□□□□□ -2.05
SPG11-223ENST00000560858 BTG1P62324 171 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 TRA2BP62995 288 aaKnown RBP2.27□□□□□ -2.05
SPG11-223ENST00000560858 HOXC5Q00444 222 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 UBE3AQ05086 875 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 EGR4Q05215 589 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 C2orf80Q0P641 193 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 FUT5Q11128 374 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 RAB40BQ12829 278 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 TMEM115Q12893 351 aaPredicted RBP2.27□□□□□ -2.05
SPG11-223ENST00000560858 ZNF155Q12901 538 aaPredicted RBP2.27□□□□□ -2.05
SPG11-223ENST00000560858 RPA4Q13156 261 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 ARHGAP19Q14CB8 494 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 QPRTQ15274 297 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 SF3A2Q15428 464 aaKnown RBP2.27□□□□□ -2.05
SPG11-223ENST00000560858 ZNF77Q15935 545 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 TAF12Q16514 161 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 TATDN3Q17R31 274 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 ZNF284Q2VY69 593 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 PGGHGQ32M88 737 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 HSD17B12Q53GQ0 312 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 ZNF805Q5CZA5 627 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 LRRC73Q5JTD7 316 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 EOGTQ5NDL2 527 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 ATAT1Q5SQI0 421 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 DCST1Q5T197 706 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 LCN1P1Q5VSP4 162 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 AADACL4Q5VUY2 407 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 KHDRBS2Q5VWX1 349 aaKnown RBP2.27□□□□□ -2.05
SPG11-223ENST00000560858 LIPKQ5VXJ0 399 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 TMEM215Q68D42 235 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 C22orf42Q6IC83 251 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 C1orf94Q6P1W5 598 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 TNFAIP8L2Q6P589 184 aaPredicted RBP2.27□□□□□ -2.05
SPG11-223ENST00000560858 PODNL1Q6PEZ8 512 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 CNIH2Q6PI25 160 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 PAQR6Q6TCH4 344 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 FAM131AQ6UXB0 335 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 ANGPTL8Q6UXH0 198 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 CASP12Q6UXS9 341 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 TMIGD1Q6UXZ0 262 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 WASH2PQ6VEQ5 465 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 ZNF620Q6ZNG0 422 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 RASSF6Q6ZTQ3 369 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 ZNF767PQ75MW2 155 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 NANOGNBQ7Z5D8 188 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 C11orf96Q7Z7L8 435 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 ADIPOR2Q86V24 386 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 NUDT13Q86X67 352 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 GATAD2AQ86YP4 633 aa2.27□□□□□ -2.05
SPG11-223ENST00000560858 DCUN1D3Q8IWE4 304 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms