RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 GPR160Q9UJ42 338 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 SCP2D1Q9UJQ7 156 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 ZNF490Q9ULM2 529 aaPredicted RBP6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 SSR3Q9UNL2 185 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 MEIKINA0A087WXM9 373 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 A0A0U1RQV5 110 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 A0A0U1RRA0 63 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 D6RAR5 112 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 KLK8O60259 260 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 GADD45GO95257 159 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 TMEM225BP0DP42 221 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 SPP1P10451 314 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 NR2F6P10588 404 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 CXCL3P19876 107 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 SLC6A1P30531 599 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 CALCRP30988 508 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 PLK1P53350 603 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 LAMTOR4Q0VGL1 99 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 PON3Q15166 354 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 TAF1AQ15573 450 aaPredicted RBP6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 CARD16Q5EG05 197 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 C3orf33Q6P1S2 294 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 FAM198BQ6UWH4 519 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 RBMS3Q6XE24 437 aaKnown RBP6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 CLDN22Q8N7P3 220 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 ZNF548Q8NEK5 533 aaPredicted RBP6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 ASZ1Q8WWH4 475 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 ULK4Q96C45 1275 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 L3HYPDHQ96EM0 354 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 TPD52L3Q96J77 140 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 HRASLS5Q96KN8 279 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 CMSS1Q9BQ75 279 aaKnown RBP6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 APOL2Q9BQE5 337 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 TCEAL7Q9BRU2 100 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 ALX4Q9H161 411 aaPredicted RBP6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 R3HDMLQ9H3Y0 253 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 ZDHHC4Q9NPG8 344 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 B3GAT2Q9NPZ5 323 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 DCAF13Q9NV06 445 aaKnown RBP6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 TMEM45AQ9NWC5 275 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 ARL15Q9NXU5 204 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 KIAA1456Q9P272 454 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 ONECUT1Q9UBC0 465 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 ING1Q9UK53 422 aaPredicted RBP6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 EVPLQ92817 2033 aa6.22□□□□□ -1.41
TSPAN3-209ENST00000560715 C5orf52A6NGY3 159 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 GLTPD2A6NH11 291 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 C2CD4BA6NLJ0 364 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 HSBP1L1C9JCN9 74 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 EDN1P05305 212 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 INSRRP14616 1297 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 PVALBP20472 110 aaPredicted RBP6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 FPR3P25089 353 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 RAE1P78406 368 aaKnown RBP6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 ST3GAL4Q11206 333 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 UBXN2BQ14CS0 331 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 LAPTM4AQ15012 233 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 ZNF678Q5SXM1 525 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 BCL2L15Q5TBC7 163 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 METAP1DQ6UB28 335 aaPredicted RBP6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 CD300LDQ6UXZ3 194 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 LRRC70Q7Z2Q7 622 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 FBXO16Q8IX29 292 aaPredicted RBP6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 ZBTB2Q8N680 514 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 RASGEF1AQ8N9B8 481 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 OR4A16Q8NH70 328 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 RLN3Q8WXF3 142 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 OTULINQ96BN8 352 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 SCRN2Q96FV2 425 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 NARS2Q96I59 477 aaKnown RBP6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 OR2M2Q96R28 347 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 CCNL2Q96S94 520 aaPredicted RBP6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 CDCA4Q9BXL8 241 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 ANKRA2Q9H9E1 313 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 AMBNQ9NP70 447 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 DLL4Q9NR61 685 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 CISHQ9NSE2 258 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 SEC14L3Q9UDX4 400 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 PLEKHB1Q9UF11 243 aaPredicted RBP6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 DMRT1Q9Y5R6 373 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 TP53BP1Q12888 1972 aaPredicted RBP6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 MGAMO43451 1857 aa6.21□□□□□ -1.41
TSPAN3-209ENST00000560715 CXCR6O00574 342 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 AZIN1O14977 448 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 MDM4O15151 490 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 CASC3O15234 703 aaKnown RBP6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 SLC31A2O15432 143 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 CREG1O75629 220 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 KDM4BO94953 1096 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 MT-CYBP00156 380 aaPredicted RBP6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 HIST1H2AGP0C0S8 130 aaPredicted RBP6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 HIST1H2ADP20671 130 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 MC3RP41968 323 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 MAGEA2P43356 314 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 CDKN1BP46527 198 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 NR0B1P51843 470 aaKnown RBP6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 CNN1P51911 297 aaKnown RBP6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 SUCLG1P53597 346 aaKnown RBP6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 TAS2R60P59551 318 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 OSTNP61366 133 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms