RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 ZNF385BQ569K4 471 aa15.56■□□□□ 0.08
TSPAN3-208ENST00000560514 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.56■□□□□ 0.08
TSPAN3-208ENST00000560514 OR52E4Q8NGH9 312 aa15.56■□□□□ 0.08
TSPAN3-208ENST00000560514 SNX18Q96RF0 628 aa15.56■□□□□ 0.08
TSPAN3-208ENST00000560514 THUMPD3Q9BV44 507 aaKnown RBP15.56■□□□□ 0.08
TSPAN3-208ENST00000560514 PARPBPQ9NWS1 579 aa15.56■□□□□ 0.08
TSPAN3-208ENST00000560514 FBXO9Q9UK97 447 aaPredicted RBP15.56■□□□□ 0.08
TSPAN3-208ENST00000560514 EMCNQ9ULC0 261 aa15.56■□□□□ 0.08
TSPAN3-208ENST00000560514 A0A1W2PPM1 405 aa15.55■□□□□ 0.08
TSPAN3-208ENST00000560514 ZNF716A6NP11 495 aa15.55■□□□□ 0.08
TSPAN3-208ENST00000560514 NPIPB8E9PQR5 432 aa15.55■□□□□ 0.08
TSPAN3-208ENST00000560514 TBX19O60806 448 aa15.55■□□□□ 0.08
TSPAN3-208ENST00000560514 DAOP14920 347 aa15.55■□□□□ 0.08
TSPAN3-208ENST00000560514 FRKP42685 505 aaPredicted RBP15.55■□□□□ 0.08
TSPAN3-208ENST00000560514 FOXG1P55316 489 aaPredicted RBP15.55■□□□□ 0.08
TSPAN3-208ENST00000560514 SESN3P58005 492 aa15.55■□□□□ 0.08
TSPAN3-208ENST00000560514 ZNF418Q8TF45 676 aaPredicted RBP15.55■□□□□ 0.08
TSPAN3-208ENST00000560514 TSSK3Q96PN8 268 aa15.55■□□□□ 0.08
TSPAN3-208ENST00000560514 CCT7Q99832 543 aa15.55■□□□□ 0.08
TSPAN3-208ENST00000560514 RHOXF2Q9BQY4 288 aa15.55■□□□□ 0.08
TSPAN3-208ENST00000560514 ACTRT3Q9BYD9 372 aa15.55■□□□□ 0.08
TSPAN3-208ENST00000560514 CA10Q9NS85 328 aa15.55■□□□□ 0.08
TSPAN3-208ENST00000560514 C1orf109Q9NX04 203 aa15.55■□□□□ 0.08
TSPAN3-208ENST00000560514 TBK1Q9UHD2 729 aa15.55■□□□□ 0.08
TSPAN3-208ENST00000560514 ETV2O00321 342 aaPredicted RBP15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 SLC28A1O00337 649 aa15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 CRYAAP02489 173 aa15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 PROCP04070 461 aa15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 TACSTD2P09758 323 aa15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 UROSP10746 265 aa15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 PGCP20142 388 aa15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 EFNA1P20827 205 aaPredicted RBP15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 COMPP49747 757 aaPredicted RBP15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 IDH3GP51553 393 aaPredicted RBP15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 DVL1P1P54792 670 aaPredicted RBP15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 CDH15P55291 814 aa15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 TP53BP2Q13625 1128 aa15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 SPDYE7PQ495Y7 208 aa15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 CFAP157Q5JU67 520 aa15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 SHQ1Q6PI26 577 aaKnown RBP15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 VHLLQ6RSH7 139 aa15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 NEU4Q8WWR8 484 aaPredicted RBP15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 ZNF524Q96C55 264 aa15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 LAT2Q9GZY6 243 aa15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 OXSMQ9NWU1 459 aa15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 SLC9A8Q9Y2E8 581 aa15.54■□□□□ 0.08
TSPAN3-208ENST00000560514 TENM1Q9UKZ4 2725 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 MGAM2Q2M2H8 2515 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 VSTM5A8MXK1 200 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 DNPH1O43598 174 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 PLIN3O60664 434 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 PDE5AO76074 875 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 PMS2P2O95744 297 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 OR4A8P0C604 315 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 CPA3P15088 417 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 CDH2P19022 906 aaPredicted RBP15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 PRPH2P23942 346 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 GIFP27352 417 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 IL2RGP31785 369 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 SLC1A3P43003 542 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 PPOXP50336 477 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 SLC16A1P53985 500 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 SLC25A3Q00325 362 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 KIAA0040Q15053 153 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 EXOSC6Q5RKV6 272 aaKnown RBP15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 PDZK1Q5T2W1 519 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 RNF165Q6ZSG1 346 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 FRMD7Q6ZUT3 714 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 R3HCC1LQ7Z5L2 792 aaKnown RBP15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 GLCCI1Q86VQ1 547 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 SEMA6DQ8NFY4 1073 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 OR56A1Q8NGH5 318 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 CLHC1Q8NHS4 586 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 ZNF563Q8TA94 476 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 DNAJA3Q96EY1 480 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 HDGFL3Q9Y3E1 203 aa15.53■□□□□ 0.08
TSPAN3-208ENST00000560514 SERINC4A6NH21 518 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 FAM157AC9JC47 383 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 TRIM77I1YAP6 450 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 PDLIM1O00151 329 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 ANKRD28O15084 1053 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 LILRA1O75019 489 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 SLU7O95391 586 aaKnown RBP15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 CSTAP01040 98 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 IFNGR1P15260 489 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 MPGP29372 298 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 NTF4P34130 210 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 APOBEC1P41238 236 aaKnown RBP15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 CCT3P49368 545 aaKnown RBP15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 OR2B6P58173 313 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 LGALS3BPQ08380 585 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 ZSWIM7Q19AV6 140 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 CCDC103Q8IW40 242 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 MTERF3Q96E29 417 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 SAP130Q9H0E3 1048 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 PLK3Q9H4B4 646 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 SLC7A10Q9NS82 523 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 ACER3Q9NUN7 267 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 CHRNA9Q9UGM1 479 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 MID2Q9UJV3 735 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms