RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 MBD3L2Q8NHZ7 208 aaPredicted RBP12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 KLHL4Q9C0H6 718 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 VCX3BQ9H321 246 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 ALKBH4Q9NXW9 302 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 TNFRSF10DQ9UBN6 386 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 MAGEL2Q9UJ55 1249 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 DHRS12A0PJE2 317 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 ELOVL7A1L3X0 281 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 CLDN24A6NM45 220 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 OIP5O43482 229 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 MFN2O95140 757 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 CRHP06850 196 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 UMPSP11172 480 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 PLAURQ03405 335 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 NDUFAF6Q330K2 333 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 GLYATQ6IB77 296 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 RTL6Q6ICC9 239 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 IZUMO2Q6UXV1 221 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 MRGPRGQ86SM5 289 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 OR52E4Q8NGH9 312 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 POC1BQ8TC44 478 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 LRTOMTQ8WZ04 291 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 CNOT9Q92600 299 aaKnown RBP12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 KLHL15Q96M94 604 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 PIF1Q9H611 641 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 GORASP2Q9H8Y8 452 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 C12orf10Q9HB07 376 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 TESQ9UGI8 421 aaKnown RBP12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 KLF2Q9Y5W3 355 aaPredicted RBP12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 HEATR5AQ86XA9 2040 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 PCNX3Q9H6A9 2034 aa12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 NCOA6Q14686 2063 aaPredicted RBP12.6□□□□□ -0.39
PKNOX1-209ENST00000560448 CLCA1A8K7I4 914 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 ZNF208O43345 1280 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 FMO6PO60774 539 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 ZG16O60844 167 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 IL18BPO95998 194 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 GLI4P10075 376 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 CEACAM8P31997 349 aaPredicted RBP12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 IDH2P48735 452 aaKnown RBP12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 STARP49675 285 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 POLR2HP52434 150 aaKnown RBP12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 ADORA2A-AS1P86434 159 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 SRYQ05066 204 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 TOMM34Q15785 309 aaPredicted RBP12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 GTF2IRD2BQ6EKJ0 949 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 WBP2NLQ6ICG8 309 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 MYO7BQ6PIF6 2116 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 PLEKHM3Q6ZWE6 761 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 GTF2IRD2Q86UP8 949 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 GGNQ86UU5 652 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 MICU2Q8IYU8 434 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 LSMEM1Q8N8F7 131 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 ITLN2Q8WWU7 325 aaPredicted RBP12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 CPNE4Q96A23 557 aaPredicted RBP12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 ADGRG7Q96K78 797 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 TRIB1Q96RU8 372 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 TUBA1CQ9BQE3 449 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 GLRX2Q9NS18 164 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 RLIMQ9NVW2 624 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 CLCF1Q9UBD9 225 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 ZNF629Q9UEG4 869 aaPredicted RBP12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 CHRNA9Q9UGM1 479 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 BAG5Q9UL15 447 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 MCTS1Q9ULC4 181 aaKnown RBP12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 ARHGAP21Q5T5U3 1957 aa12.59□□□□□ -0.39
PKNOX1-209ENST00000560448 M0QX08 132 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 ZNHIT1O43257 154 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 HNRNPRO43390 633 aaKnown RBP12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 DNPH1O43598 174 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 RCBTB2O95199 551 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 TCEA1P23193 301 aaKnown RBP12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 RYKP34925 604 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 ACAA2P42765 397 aaKnown RBP12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 NUP107P57740 925 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 PMPCAQ10713 525 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 MERTKQ12866 999 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 SGCBQ16585 318 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 LRRC36Q1X8D7 754 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 MTX3Q5HYI7 312 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 C5orf46Q6UWT4 87 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 C3P1Q6ZMU1 363 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 RANBP3LQ86VV4 465 aaPredicted RBP12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 UBQLNLQ8IYU4 475 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 CLIP4Q8N3C7 705 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 MARVELD2Q8N4S9 558 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 OR2V1Q8NHB1 315 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 CA5BP1Q8WTZ4 195 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 NSMCE2Q96MF7 247 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 ADAM19Q9H013 955 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 GP6Q9HCN6 339 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 HDGFL3Q9Y3E1 203 aa12.58□□□□□ -0.4
PKNOX1-209ENST00000560448 DIDO1Q9BTC0 2240 aaKnown RBP12.57□□□□□ -0.4
PKNOX1-209ENST00000560448 SLC22A20A6NK97 555 aa12.57□□□□□ -0.4
PKNOX1-209ENST00000560448 EIF1AYO14602 144 aaKnown RBP12.57□□□□□ -0.4
PKNOX1-209ENST00000560448 SEC14L5O43304 696 aa12.57□□□□□ -0.4
PKNOX1-209ENST00000560448 BCAS1O75363 584 aaPredicted RBP12.57□□□□□ -0.4
PKNOX1-209ENST00000560448 TIPRLO75663 272 aa12.57□□□□□ -0.4
PKNOX1-209ENST00000560448 CLDN14O95500 239 aa12.57□□□□□ -0.4
PKNOX1-209ENST00000560448 LGI1O95970 557 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms