RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 CDK15Q96Q40 435 aa7.99□□□□□ -1.13
PPP1R3E-204ENST00000559942 DENND2DQ9H6A0 471 aaPredicted RBP7.99□□□□□ -1.13
PPP1R3E-204ENST00000559942 Q9N2J8 555 aa7.99□□□□□ -1.13
PPP1R3E-204ENST00000559942 SLC17A5Q9NRA2 495 aa7.99□□□□□ -1.13
PPP1R3E-204ENST00000559942 ADAM29Q9UKF5 820 aa7.99□□□□□ -1.13
PPP1R3E-204ENST00000559942 CHMP2BQ9UQN3 213 aa7.99□□□□□ -1.13
PPP1R3E-204ENST00000559942 AMDHD2Q9Y303 409 aa7.99□□□□□ -1.13
PPP1R3E-204ENST00000559942 NOSIPQ9Y314 301 aaKnown RBP7.99□□□□□ -1.13
PPP1R3E-204ENST00000559942 STARD9Q9P2P6 4700 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 IGHV1-18A0A0C4DH31 117 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 GJE1A6NN92 205 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 ZNF724A8MTY0 619 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 GPR37O15354 613 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 HOXA3O43365 443 aaPredicted RBP7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 PPIHO43447 177 aaKnown RBP7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 PIAS1O75925 651 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 WISP3O95389 354 aaPredicted RBP7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 OXSR1O95747 527 aaPredicted RBP7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 NUDT14O95848 222 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 IGFBP1P08833 259 aaPredicted RBP7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 LINGO3P0C6S8 592 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 HOXB1P14653 301 aaPredicted RBP7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 TCN1P20061 433 aaPredicted RBP7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 FUT4P22083 530 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 NTF4P34130 210 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 PAFAH1B1P43034 410 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 PSMD4P55036 377 aaKnown RBP7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 DYNC1I2Q13409 638 aaKnown RBP7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 ELFN2Q5R3F8 820 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 ZNF572Q7Z3I7 529 aaPredicted RBP7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 CDK20Q8IZL9 346 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 METTL4Q8N3J2 472 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 OR4C3Q8NH37 302 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 ACTRT2Q8TDY3 377 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 PIK3R3Q92569 461 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 ERP27Q96DN0 273 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 ZNF837Q96EG3 531 aaPredicted RBP7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 MRGPRX4Q96LA9 322 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 DOK1Q99704 481 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 MCMBPQ9BTE3 642 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 FAIM2Q9BWQ8 316 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 TNFRSF19Q9NS68 423 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 AHSPQ9NZD4 102 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 NUDT4Q9NZJ9 180 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 RNF14Q9UBS8 474 aa7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 MRTO4Q9UKD2 239 aaKnown RBP7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 MTO1Q9Y2Z2 717 aaKnown RBP7.98□□□□□ -1.13
PPP1R3E-204ENST00000559942 ALG1L2C9J202 215 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 PDLIM1O00151 329 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 MGRN1O60291 552 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 PLOD3O60568 738 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 COQ9O75208 318 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 CRYAAP02489 173 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 F13BP05160 661 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 TCP1P17987 556 aaKnown RBP7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 ELK4P28324 431 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 GABRA3P34903 492 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 THBS4P35443 961 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 MDH1P40925 334 aaKnown RBP7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 EIF1P41567 113 aaKnown RBP7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 RAC3P60763 192 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 PRPS1P60891 318 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 ATP6V0D1P61421 351 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 ROR2Q01974 943 aaKnown RBP7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 IFT88Q13099 833 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 GKAP1Q5VSY0 366 aaPredicted RBP7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 FAM219BQ5XKK7 198 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 GALNT18Q6P9A2 607 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 KLHL24Q6TFL4 600 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 TMEM107Q6UX40 140 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 LRIG3Q6UXM1 1119 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 PPIL6Q8IXY8 311 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 IFT20Q8IY31 132 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 FAM9CQ8IZT9 166 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 MREGQ8N565 214 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 EIF1ADQ8N9N8 165 aaKnown RBP7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 B4GALNT2Q8NHY0 566 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 FBXO30Q8TB52 745 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 TRPC4APQ8TEL6 797 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 UBTD2Q8WUN7 234 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 MAIP1Q8WWC4 291 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 CKAP2Q8WWK9 683 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 JADE3Q92613 823 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 DNAJA3Q96EY1 480 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 SLC38A2Q96QD8 506 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 OR5B2Q96R09 309 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 ZNF665Q9H7R5 613 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 IPPKQ9H8X2 491 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 SEC61A2Q9H9S3 476 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 POPDC3Q9HBV1 291 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 ZNF275Q9NSD4 429 aaPredicted RBP7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 SLC12A4Q9UP95 1085 aa7.97□□□□□ -1.13
PPP1R3E-204ENST00000559942 TMEM129A0AVI4 362 aa7.96□□□□□ -1.14
PPP1R3E-204ENST00000559942 SKAP2O75563 359 aaPredicted RBP7.96□□□□□ -1.14
PPP1R3E-204ENST00000559942 KCNH1O95259 989 aa7.96□□□□□ -1.14
PPP1R3E-204ENST00000559942 WNT11O96014 354 aa7.96□□□□□ -1.14
PPP1R3E-204ENST00000559942 HPXP02790 462 aa7.96□□□□□ -1.14
PPP1R3E-204ENST00000559942 IL3P08700 152 aa7.96□□□□□ -1.14
PPP1R3E-204ENST00000559942 NPR2P20594 1047 aa7.96□□□□□ -1.14
PPP1R3E-204ENST00000559942 CALCRP30988 508 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms