RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 GPR176Q14439 515 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 ZNF267Q14586 743 aaPredicted RBP9.24□□□□□ -0.93
LRRC28-216ENST00000559819 ACSM3Q53FZ2 586 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 LYPD4Q6UWN0 246 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 DUSP18Q8NEJ0 188 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 TRMT10AQ8TBZ6 339 aaKnown RBP9.24□□□□□ -0.93
LRRC28-216ENST00000559819 GHSRQ92847 366 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 CYSLTR2Q9NS75 346 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 WSB2Q9NYS7 404 aaPredicted RBP9.24□□□□□ -0.93
LRRC28-216ENST00000559819 LRIT1Q9P2V4 623 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 ST6GALNAC2Q9UJ37 374 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 IER3IP1Q9Y5U9 82 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 OR5K3A6NET4 321 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 C4orf47A7E2U8 309 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 PEPDP12955 493 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 F8A1P23610 371 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 SLC6A6P31641 620 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 EFR3AQ14156 821 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 RCBTB1Q8NDN9 531 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 ACOT12Q8WYK0 555 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 RIT1Q92963 219 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 ORAI1Q96D31 301 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 THAP7Q9BT49 309 aaPredicted RBP9.24□□□□□ -0.93
LRRC28-216ENST00000559819 LMF2Q9BU23 707 aaKnown RBP9.24□□□□□ -0.93
LRRC28-216ENST00000559819 GSDMCQ9BYG8 508 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 INPP5EQ9NRR6 644 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 CD207Q9UJ71 328 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 CYP8B1Q9UNU6 501 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 NOX1Q9Y5S8 564 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 LRP4O75096 1905 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 YES1P07947 543 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 PTBP1P26599 531 aaKnown RBP eCLIP9.23□□□□□ -0.93
LRRC28-216ENST00000559819 PSMB10P40306 273 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 PGDP52209 483 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 MAZP56270 477 aaKnown RBP9.23□□□□□ -0.93
LRRC28-216ENST00000559819 HHEXQ03014 270 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 STX4Q12846 297 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 NDUFA5Q16718 116 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 DMKNQ6E0U4 476 aaPredicted RBP9.23□□□□□ -0.93
LRRC28-216ENST00000559819 RTL4Q6ZR62 310 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 ESPNLQ6ZVH7 1005 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 OOSP2Q86WS3 158 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 LRRC28Q86X40 367 aaPredicted RBP9.23□□□□□ -0.93
LRRC28-216ENST00000559819 ARHGEF39Q8N4T4 335 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 BMPERQ8N8U9 685 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 GATSQ8NAP1 163 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 OR4D9Q8NGE8 314 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 VSTM2LQ96N03 204 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 LMF1Q96S06 567 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 ABHD1Q96SE0 405 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 ZNF426Q9BUY5 554 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 SLC28A3Q9HAS3 691 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 TRPV5Q9NQA5 729 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 MCUBQ9NWR8 336 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 EYSQ5T1H1 3165 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 INMT-MINDY4F8WBC2 141 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 SERPINI2O75830 405 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 SC5DO75845 299 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 SNRPBP14678 240 aaKnown RBP9.23□□□□□ -0.93
LRRC28-216ENST00000559819 MAOAP21397 527 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 S100A1P23297 94 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 FZD2Q14332 565 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 ZNHIT3Q15649 155 aaPredicted RBP9.23□□□□□ -0.93
LRRC28-216ENST00000559819 SNAP47Q5SQN1 464 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 ARHGAP11AQ6P4F7 1023 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 PXKQ7Z7A4 578 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 GPALPP1Q8IXQ4 340 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 HOXB13Q92826 284 aaPredicted RBP9.23□□□□□ -0.93
LRRC28-216ENST00000559819 TRIM63Q969Q1 353 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 RFT1Q96AA3 541 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 TRIM2Q9C040 744 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 POLE3Q9NRF9 147 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 CHRNA9Q9UGM1 479 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 COPS3Q9UNS2 423 aa9.23□□□□□ -0.93
LRRC28-216ENST00000559819 KNL1Q8NG31 2342 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 FAM171A2A8MVW0 826 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 IDSB3KWA1 339 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 PSMD9O00233 223 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 FOXS1O43638 330 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 SELENOFO60613 162 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 IFNGP01579 166 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 THEGLP0DJG4 465 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 ARSBP15848 533 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 DRD1P21728 446 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 GRPRP30550 384 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 EVI2BP34910 448 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 TALDO1P37837 337 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 RABIFP47224 123 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 MRPS21P82921 87 aaKnown RBP9.22□□□□□ -0.93
LRRC28-216ENST00000559819 FGFBP1Q14512 234 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 ARMC6Q6NXE6 501 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 MTFR2Q6P444 385 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 MCATQ8IVS2 390 aaKnown RBP9.22□□□□□ -0.93
LRRC28-216ENST00000559819 C19orf47Q8N9M1 422 aaKnown RBP9.22□□□□□ -0.93
LRRC28-216ENST00000559819 OR4C3Q8NH37 302 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 LILRB4Q8NHJ6 448 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 ZDHHC1Q8WTX9 485 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 RASD2Q96D21 266 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 SGTBQ96EQ0 304 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 PELI1Q96FA3 418 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms