RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 UNC119BA6NIH7 251 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 EEF1E1O43324 174 aaKnown RBP9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 CDK1P06493 297 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 HOXB3P14651 431 aaPredicted RBP9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 CD22P20273 847 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 SOX3P41225 446 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 SLC6A8P48029 635 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 PTGES3Q15185 160 aaKnown RBP9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 TBCEQ15813 527 aaPredicted RBP9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 SGCAQ16586 387 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 C1orf94Q6P1W5 598 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 LINC00299Q6ZSB3 139 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 MAMDC2Q7Z304 686 aaPredicted RBP9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 LACC1Q8IV20 430 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 CA13Q8N1Q1 262 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 ZFP41Q8N8Y5 198 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 OR2T33Q8NG76 320 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 OR8J1Q8NGP2 316 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 CREB3L1Q96BA8 519 aa9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 FAM46AQ96IP4 442 aaKnown RBP9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 ZNF300Q96RE9 604 aaPredicted RBP9.88□□□□□ -0.83
CARMIL3-202ENST00000559694 IQCMA0A1B0GVH7 501 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 C2orf72A6NCS6 295 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 OR14I1A6ND48 311 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 CASC3O15234 703 aaKnown RBP9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 LYRM1O43325 122 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 CLRN1P58418 232 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 SELENBP1Q13228 472 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 DSG2Q14126 1118 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 CDK10Q15131 360 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 MAPK14Q16539 360 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 MRPL2Q5T653 305 aaKnown RBP9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 MFSD12Q6NUT3 480 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 Q6ZPB1 254 aaPredicted RBP9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 LHFPL3Q86UP9 236 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 ATCAYQ86WG3 371 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 MEX3DQ86XN8 651 aaKnown RBP9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 PLCZ1Q86YW0 608 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 YIPF7Q8N8F6 280 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 COQ8AQ8NI60 647 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 KLK10O43240 276 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 FARS2O95363 451 aaKnown RBP9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 WNT1P04628 370 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 MNDAP41218 407 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 GP2P55259 537 aaKnown RBP9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 AQP6Q13520 282 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 SYT6Q5T7P8 510 aaPredicted RBP9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 B3GNT7Q8NFL0 401 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 OR1L3Q8NH93 324 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 NEURL3Q96EH8 262 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 DUS3LQ96G46 650 aaKnown RBP9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 HDHD5Q9BXW7 423 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 RLIMQ9NVW2 624 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 CTSFQ9UBX1 484 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 ZNF69Q9UC07 566 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 ZNF225Q9UK10 706 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 H7C2Y5 167 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 SULT2B1O00204 365 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 ZNF264O43296 627 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 ZNF43P17038 809 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 POU3F3P20264 500 aaPredicted RBP9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 TLE3Q04726 772 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 SLC3A1Q07837 685 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 TRA2AQ13595 282 aaKnown RBP eCLIP9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 EXT1Q16394 746 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 TATDN3Q17R31 274 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 BCL2L15Q5TBC7 163 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 PRAMEF8Q5VWM4 474 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 PRAMEF7Q5VXH5 474 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 COMMD7Q86VX2 200 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 SLC22A18ASQ8N1D0 253 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 FAM86B1Q8N7N1 296 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 OR9Q2Q8NGE9 314 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 C1orf216Q8TAB5 229 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 ZNF578Q96N58 590 aaPredicted RBP9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 OR2A5Q96R48 311 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 ERVMER34-1Q9H9K5 563 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 TMEM74BQ9NUR3 256 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 ASB6Q9NWX5 421 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 CNIH4Q9P003 139 aa9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 BOKQ9UMX3 212 aaPredicted RBP9.87□□□□□ -0.83
CARMIL3-202ENST00000559694 APOC3P02656 99 aa9.86□□□□□ -0.83
CARMIL3-202ENST00000559694 CYB561P49447 251 aa9.86□□□□□ -0.83
CARMIL3-202ENST00000559694 CTXN1P60606 82 aa9.86□□□□□ -0.83
CARMIL3-202ENST00000559694 ISL1P61371 349 aa9.86□□□□□ -0.83
CARMIL3-202ENST00000559694 SCRN3Q0VDG4 424 aa9.86□□□□□ -0.83
CARMIL3-202ENST00000559694 EIF3IQ13347 325 aaKnown RBP9.86□□□□□ -0.83
CARMIL3-202ENST00000559694 HSD17B12Q53GQ0 312 aa9.86□□□□□ -0.83
CARMIL3-202ENST00000559694 EEF1A1P5Q5VTE0 462 aa9.86□□□□□ -0.83
CARMIL3-202ENST00000559694 SLC22A10Q63ZE4 541 aa9.86□□□□□ -0.83
CARMIL3-202ENST00000559694 ZNF676Q8N7Q3 588 aa9.86□□□□□ -0.83
CARMIL3-202ENST00000559694 GATAD2BQ8WXI9 593 aa9.86□□□□□ -0.83
CARMIL3-202ENST00000559694 CSF3RQ99062 836 aa9.86□□□□□ -0.83
CARMIL3-202ENST00000559694 WDR77Q9BQA1 342 aaPredicted RBP9.86□□□□□ -0.83
CARMIL3-202ENST00000559694 CENPOQ9BU64 300 aa9.86□□□□□ -0.83
CARMIL3-202ENST00000559694 DPH1Q9BZG8 443 aa9.86□□□□□ -0.83
CARMIL3-202ENST00000559694 AMBRA1Q9C0C7 1298 aa9.86□□□□□ -0.83
CARMIL3-202ENST00000559694 NMNAT1Q9HAN9 279 aaPredicted RBP9.86□□□□□ -0.83
CARMIL3-202ENST00000559694 CKLFQ9UBR5 152 aa9.86□□□□□ -0.83
CARMIL3-202ENST00000559694 A0A1W2PPL8 197 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms