RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 WFDC8Q8IUA0 241 aa7.3□□□□□ -1.24
SNX1-207ENST00000559401 NFKBIDQ8NI38 313 aa7.3□□□□□ -1.24
SNX1-207ENST00000559401 BBS10Q8TAM1 723 aa7.3□□□□□ -1.24
SNX1-207ENST00000559401 PMM1Q92871 262 aa7.3□□□□□ -1.24
SNX1-207ENST00000559401 MAL2Q969L2 176 aa7.3□□□□□ -1.24
SNX1-207ENST00000559401 ZNF775Q96BV0 537 aaPredicted RBP7.3□□□□□ -1.24
SNX1-207ENST00000559401 DDIT4LQ96D03 193 aa7.3□□□□□ -1.24
SNX1-207ENST00000559401 SIKE1Q9BRV8 207 aa7.3□□□□□ -1.24
SNX1-207ENST00000559401 TACO1Q9BSH4 297 aaKnown RBP7.3□□□□□ -1.24
SNX1-207ENST00000559401 CCDC106Q9BWC9 280 aa7.3□□□□□ -1.24
SNX1-207ENST00000559401 TMEM120AQ9BXJ8 343 aa7.3□□□□□ -1.24
SNX1-207ENST00000559401 A4GALTQ9NPC4 353 aa7.3□□□□□ -1.24
SNX1-207ENST00000559401 CCM2LQ9NUG4 571 aaPredicted RBP7.3□□□□□ -1.24
SNX1-207ENST00000559401 SLC25A37Q9NYZ2 338 aa7.3□□□□□ -1.24
SNX1-207ENST00000559401 VAPAQ9P0L0 249 aa7.3□□□□□ -1.24
SNX1-207ENST00000559401 SLAMF8Q9P0V8 285 aa7.3□□□□□ -1.24
SNX1-207ENST00000559401 ST6GALNAC2Q9UJ37 374 aa7.3□□□□□ -1.24
SNX1-207ENST00000559401 CORO2BQ9UQ03 480 aa7.3□□□□□ -1.24
SNX1-207ENST00000559401 CCDC168Q8NDH2 2452 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 A0A1W2PP18 115 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 TMEM72A0PK05 275 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 FAM221AA4D161 298 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 CDHR4A6H8M9 788 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 FRS3O43559 492 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 PMS2P2O95744 297 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 HRGP04196 525 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 THBS1P07996 1170 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 CRYGSP22914 178 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 IL32P24001 234 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 CXCR1P25024 350 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 AQP1P29972 269 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 SLC1A3P43003 542 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 IST1P53990 364 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 CDK6Q00534 326 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 TSC22D1Q15714 1073 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 MAPK11Q15759 364 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 CYP51A1Q16850 503 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 RNF220Q5VTB9 566 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 REEP3Q6NUK4 255 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 PAMR1Q6UXH9 720 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 TFAP2EQ6VUC0 442 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 STAC2Q6ZMT1 411 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 LSRQ86X29 649 aaPredicted RBP7.29□□□□□ -1.24
SNX1-207ENST00000559401 CXorf67Q86X51 503 aaPredicted RBP7.29□□□□□ -1.24
SNX1-207ENST00000559401 ADGRG3Q86Y34 549 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 KRT73Q86Y46 540 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 MSRB3Q8IXL7 192 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 ZNF100Q8IYN0 542 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 PIGXQ8TBF5 258 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 RNF217Q8TC41 542 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 ARL5BQ96KC2 179 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 ZNF300Q96RE9 604 aaPredicted RBP7.29□□□□□ -1.24
SNX1-207ENST00000559401 PSD2Q9BQI7 771 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 SPATA9Q9BWV2 254 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 ACTR6Q9GZN1 396 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 GP6Q9HCN6 339 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 FGFR1OP2Q9NVK5 253 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 ZNF446Q9NWS9 450 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 EMC3Q9P0I2 261 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 TMEM181Q9P2C4 612 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 RPS6KB2Q9UBS0 482 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 OSGIN1Q9UJX0 560 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 SLC13A4Q9UKG4 626 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 IFT52Q9Y366 437 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 NDUFAF1Q9Y375 327 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 HDGFL3Q9Y3E1 203 aa7.29□□□□□ -1.24
SNX1-207ENST00000559401 ADGRG4Q8IZF6 3080 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 FAAHO00519 579 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 CYTIPO60759 359 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 PGM3O95394 542 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 ADAP00813 363 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 RAF1P04049 648 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 ARAFP10398 606 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 BMP2P12643 396 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 PRG2P13727 222 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 CD1EP15812 388 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 PPP3CBP16298 524 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 HOXB9P17482 250 aaPredicted RBP7.28□□□□□ -1.24
SNX1-207ENST00000559401 FPR1P21462 350 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 SLC6A2P23975 617 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 FKBP2P26885 142 aaKnown RBP7.28□□□□□ -1.24
SNX1-207ENST00000559401 IDUAP35475 653 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 PCYT1AP49585 367 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 CLK1P49759 484 aaKnown RBP7.28□□□□□ -1.24
SNX1-207ENST00000559401 ARFIP2P53365 341 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 MTPNP58546 118 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 NCALDP61601 193 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 SLC35A1P78382 337 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 HOXC5Q00444 222 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 BNIP2Q12982 314 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 NFYCQ13952 458 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 SCARB2Q14108 478 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 CAPRIN1Q14444 709 aaKnown RBP7.28□□□□□ -1.24
SNX1-207ENST00000559401 STK11Q15831 433 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 ZSWIM7Q19AV6 140 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 PRAMEF8Q5VWM4 474 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 PRAMEF7Q5VXH5 474 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 AP1ARQ63HQ0 302 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 ABLIM2Q6H8Q1 611 aa7.28□□□□□ -1.24
SNX1-207ENST00000559401 WBP2NLQ6ICG8 309 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms