RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 BTLAQ7Z6A9 289 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 HMGN2P46Q86SG4 172 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 DHDDSQ86SQ9 333 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 SERPINA11Q86U17 422 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 MTDHQ86UE4 582 aaKnown RBP3.91□□□□□ -1.78
SNX1-205ENST00000559339 RETREG3Q86VR2 466 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 VRK2Q86Y07 508 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 ADGRG3Q86Y34 549 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 ARMC8Q8IUR7 673 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 SLC30A8Q8IWU4 369 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 TUSC5Q8IXB3 177 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 ZNF295-AS1Q8N0V1 137 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 CADM2Q8N3J6 435 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 DPP10Q8N608 796 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 ZNF610Q8N9Z0 462 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 C11orf65Q8NCR3 313 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 LINC01560Q8TB33 94 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 PIGXQ8TBF5 258 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 SLC26A7Q8TE54 656 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 ABHD3Q8WU67 409 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 RASSF5Q8WWW0 418 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 ROBO4Q8WZ75 1007 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 MAL2Q969L2 176 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 SLC35B4Q969S0 331 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 LURAP1Q96LR2 239 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 ANKRD27Q96NW4 1050 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 NPAS1Q99742 590 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 USB1Q9BQ65 265 aaKnown RBP3.91□□□□□ -1.78
SNX1-205ENST00000559339 ECSITQ9BQ95 431 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 GPATCH1Q9BRR8 931 aaKnown RBP3.91□□□□□ -1.78
SNX1-205ENST00000559339 NAA11Q9BSU3 229 aaPredicted RBP3.91□□□□□ -1.78
SNX1-205ENST00000559339 CCDC106Q9BWC9 280 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 SPATA9Q9BWV2 254 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 TAPBPLQ9BX59 468 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 TMEM120AQ9BXJ8 343 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 HDHD5Q9BXW7 423 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 KLHL4Q9C0H6 718 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 OPN3Q9H1Y3 402 aaPredicted RBP3.91□□□□□ -1.78
SNX1-205ENST00000559339 CCDC134Q9H6E4 229 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 TMEM38AQ9H6F2 299 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 C12orf49Q9H741 205 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 EVA1AQ9H8M9 152 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 BCL2L10Q9HD36 194 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 CTPS2Q9NRF8 586 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 RASSF1Q9NS23 344 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 RLIMQ9NVW2 624 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 GID8Q9NWU2 228 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 DNAJB12Q9NXW2 375 aaKnown RBP3.91□□□□□ -1.78
SNX1-205ENST00000559339 SLC25A37Q9NYZ2 338 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 VAPAQ9P0L0 249 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 SLAMF8Q9P0V8 285 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 TMEM181Q9P2C4 612 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 KLHL14Q9P2G3 628 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 RPS6KB2Q9UBS0 482 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 CLEC4AQ9UMR7 237 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 TRAPPC4Q9Y296 219 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 ZNF443Q9Y2A4 671 aaPredicted RBP3.91□□□□□ -1.78
SNX1-205ENST00000559339 GMEB1Q9Y692 573 aa3.91□□□□□ -1.78
SNX1-205ENST00000559339 NUP214P35658 2090 aaPredicted RBP3.91□□□□□ -1.78
SNX1-205ENST00000559339 CACNA1DQ01668 2161 aa3.9□□□□□ -1.78
SNX1-205ENST00000559339 INTS1Q8N201 2190 aaKnown RBP3.9□□□□□ -1.78
SNX1-205ENST00000559339 MED12Q93074 2177 aa3.9□□□□□ -1.78
SNX1-205ENST00000559339 PHF3Q92576 2039 aaKnown RBP3.9□□□□□ -1.78
SNX1-205ENST00000559339 NBPF19A0A087WUL8 3843 aa3.9□□□□□ -1.78
SNX1-205ENST00000559339 ANKHD1Q8IWZ3 2542 aaKnown RBP3.9□□□□□ -1.78
SNX1-205ENST00000559339 CACNA1CQ13936 2221 aa3.9□□□□□ -1.78
SNX1-205ENST00000559339 ABCA12Q86UK0 2595 aa3.9□□□□□ -1.78
SNX1-205ENST00000559339 TMED7-TICAM2A0A0A6YYA0 188 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 IGHV3-15A0A0B4J1V0 119 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 LOC100653049A0A140TA62 436 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 A0A1W2PNR3 127 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 PRAMEF27A3QJZ7 478 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 ELOA3DA6NLF2 546 aaPredicted RBP3.9□□□□□ -1.79
SNX1-205ENST00000559339 ZNF724A8MTY0 619 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 A8MVM7 634 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 AP3D1O14617 1153 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 OIP5O43482 229 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 OR2T1O43869 369 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 EFNA2O43921 213 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 CYTIPO60759 359 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 BCAS1O75363 584 aaPredicted RBP3.9□□□□□ -1.79
SNX1-205ENST00000559339 MRPL33O75394 65 aaKnown RBP3.9□□□□□ -1.79
SNX1-205ENST00000559339 CTAG2O75638 210 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 KRT34O76011 436 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 CNOT4O95628 575 aaKnown RBP3.9□□□□□ -1.79
SNX1-205ENST00000559339 PMS2P2O95744 297 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 CGAP01215 116 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 IFNA14P01570 189 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 C1QCP02747 245 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 GPIP06744 558 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 FESP07332 822 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 GKN3PP0CG01 181 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 ARAFP10398 606 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 PNMTP11086 282 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 CCNA2P20248 432 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 IL32P24001 234 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 GTF2E2P29084 291 aaKnown RBP3.9□□□□□ -1.79
SNX1-205ENST00000559339 SHC1P29353 583 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 AQP1P29972 269 aa3.9□□□□□ -1.79
SNX1-205ENST00000559339 AGTR1P30556 359 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms