RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 CD53P19397 219 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 TBXA2RP21731 343 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 ARRB2P32121 409 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 ZNF117Q03924 483 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 PDE7AQ13946 482 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 TSC22D1Q15714 1073 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.54□□□□□ -1.36
SPG11-213ENST00000558988 CTU2Q2VPK5 515 aaKnown RBP6.54□□□□□ -1.36
SPG11-213ENST00000558988 PLPPR5Q32ZL2 321 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 KRT71Q3SY84 523 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 Q5PR19 223 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 DCST2Q5T1A1 773 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 HMGN2P46Q86SG4 172 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 NUDCD3Q8IVD9 361 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 METTL25Q8N6Q8 603 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 EIF1ADQ8N9N8 165 aaKnown RBP6.54□□□□□ -1.36
SPG11-213ENST00000558988 ZNF527Q8NB42 609 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 OR5D16Q8NGK9 328 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 OR6Y1Q8NGX8 325 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 OR2V1Q8NHB1 315 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 ADAMTS15Q8TE58 950 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 OSTF1Q92882 214 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 DNAJA3Q96EY1 480 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 GIMAP5Q96F15 307 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 REXO5Q96IC2 774 aaKnown RBP6.54□□□□□ -1.36
SPG11-213ENST00000558988 METTL2AQ96IZ6 378 aaKnown RBP6.54□□□□□ -1.36
SPG11-213ENST00000558988 FCRL1Q96LA6 429 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 PAIP2Q9BPZ3 127 aaKnown RBP6.54□□□□□ -1.36
SPG11-213ENST00000558988 BTBD2Q9BX70 525 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 UBQLN4Q9NRR5 601 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 SIRT3Q9NTG7 399 aaPredicted RBP6.54□□□□□ -1.36
SPG11-213ENST00000558988 ATAD3AQ9NVI7 634 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 ELOVL5Q9NYP7 299 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 ATP6V1HQ9UI12 483 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 CARD8Q9Y2G2 431 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 TMED5Q9Y3A6 229 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 KCNE3Q9Y6H6 103 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 ADGRG4Q8IZF6 3080 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 NUP214P35658 2090 aaPredicted RBP6.53□□□□□ -1.36
SPG11-213ENST00000558988 A0A087WZY1 265 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 IGLV3-32A0A0A0MS00 114 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 IGHV3-15A0A0B4J1V0 119 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 H3BNH8 94 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 KLF4O43474 513 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 CGAP01215 116 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 TUBBP07437 444 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 G6PDP11413 515 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 ZNF17P17021 662 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 CRYGSP22914 178 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 RPL3P39023 403 aaKnown RBP6.53□□□□□ -1.36
SPG11-213ENST00000558988 FRKP42685 505 aaPredicted RBP6.53□□□□□ -1.36
SPG11-213ENST00000558988 NME5P56597 212 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 CARD18P57730 90 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 CAPRIN1Q14444 709 aaKnown RBP6.53□□□□□ -1.36
SPG11-213ENST00000558988 FGFBP1Q14512 234 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 GPR68Q15743 365 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 CHI3L2Q15782 390 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 TOMM34Q15785 309 aaPredicted RBP6.53□□□□□ -1.36
SPG11-213ENST00000558988 UGT3A2Q3SY77 523 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 TMEM176BQ3YBM2 270 aaPredicted RBP6.53□□□□□ -1.36
SPG11-213ENST00000558988 GLYR1Q49A26 553 aaPredicted RBP6.53□□□□□ -1.36
SPG11-213ENST00000558988 XKR7Q5GH72 579 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 C6orf136Q5SQH8 315 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.53□□□□□ -1.36
SPG11-213ENST00000558988 PDSS1Q5T2R2 415 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 CBLN3Q6UW01 205 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 ANKRD46Q86W74 232 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 CCDC103Q8IW40 242 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 CLECL1Q8IZS7 167 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 GTPBP8Q8N3Z3 284 aaPredicted RBP6.53□□□□□ -1.36
SPG11-213ENST00000558988 RIBC1Q8N443 379 aaPredicted RBP6.53□□□□□ -1.36
SPG11-213ENST00000558988 OR56A1Q8NGH5 318 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 OR4A15Q8NGL6 344 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 OR6K3Q8NGY3 331 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 POC1BQ8TC44 478 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 ABHD3Q8WU67 409 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 MTERF3Q96E29 417 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 GMPPAQ96IJ6 420 aaPredicted RBP6.53□□□□□ -1.36
SPG11-213ENST00000558988 KLHL15Q96M94 604 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 Q96MF0 132 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 OR7D2Q96RA2 312 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 PRPF18Q99633 342 aaKnown RBP6.53□□□□□ -1.36
SPG11-213ENST00000558988 DUSP26Q9BV47 211 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 ACTRT3Q9BYD9 372 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 PIGUQ9H490 435 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 BEX4Q9NWD9 120 aaPredicted RBP6.53□□□□□ -1.36
SPG11-213ENST00000558988 MKS1Q9NXB0 559 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 LGALS13Q9UHV8 139 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 ZDHHC2Q9UIJ5 367 aa6.53□□□□□ -1.36
SPG11-213ENST00000558988 ACANP16112 2415 aa6.52□□□□□ -1.36
SPG11-213ENST00000558988 HEATR5AQ86XA9 2040 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 RNF103-CHMP3A0A140T963 221 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.52□□□□□ -1.37
SPG11-213ENST00000558988 C9JVG2 144 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 H7C1Q1 480 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 ZNF195O14628 629 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 RGS16O15492 202 aaPredicted RBP6.52□□□□□ -1.37
SPG11-213ENST00000558988 CLOCKO15516 846 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 ARHGEF9O43307 516 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 ITM2AO43736 263 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms