RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 UFL1O94874 794 aa2.1□□□□□ -2.07
VPS13C-207ENST00000558919 LGI1O95970 557 aa2.1□□□□□ -2.07
VPS13C-207ENST00000558919 TBXA2RP21731 343 aa2.1□□□□□ -2.07
VPS13C-207ENST00000558919 PMELP40967 661 aa2.1□□□□□ -2.07
VPS13C-207ENST00000558919 CCR6P51684 374 aa2.1□□□□□ -2.07
VPS13C-207ENST00000558919 TAS2R19P59542 299 aa2.1□□□□□ -2.07
VPS13C-207ENST00000558919 PDZK1IP1Q13113 114 aa2.1□□□□□ -2.07
VPS13C-207ENST00000558919 GGTLC2Q14390 218 aa2.1□□□□□ -2.07
VPS13C-207ENST00000558919 NRF1Q16656 503 aa2.1□□□□□ -2.07
VPS13C-207ENST00000558919 C1orf100Q5SVJ3 147 aa2.1□□□□□ -2.07
VPS13C-207ENST00000558919 C6orf89Q6UWU4 347 aa2.1□□□□□ -2.07
VPS13C-207ENST00000558919 DPY19L4Q7Z388 723 aa2.1□□□□□ -2.07
VPS13C-207ENST00000558919 TPRA1Q86W33 373 aa2.1□□□□□ -2.07
VPS13C-207ENST00000558919 DUSP18Q8NEJ0 188 aa2.1□□□□□ -2.07
VPS13C-207ENST00000558919 OR51G2Q8NGK0 314 aa2.1□□□□□ -2.07
VPS13C-207ENST00000558919 BRSK1Q8TDC3 778 aa2.1□□□□□ -2.07
VPS13C-207ENST00000558919 MRPS31Q92665 395 aaKnown RBP2.1□□□□□ -2.07
VPS13C-207ENST00000558919 CCNL2Q96S94 520 aaPredicted RBP2.1□□□□□ -2.07
VPS13C-207ENST00000558919 PELOQ9BRX2 385 aaKnown RBP2.1□□□□□ -2.07
VPS13C-207ENST00000558919 OR11A1Q9GZK7 315 aa2.1□□□□□ -2.07
VPS13C-207ENST00000558919 ODF2LQ9ULJ1 636 aa2.1□□□□□ -2.07
VPS13C-207ENST00000558919 MAD1L1Q9Y6D9 718 aa2.1□□□□□ -2.07
VPS13C-207ENST00000558919 CLSPNQ9HAW4 1339 aa2.1□□□□□ -2.07
VPS13C-207ENST00000558919 PTCH1Q13635 1447 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 SLIT3O75094 1523 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 A0A1W2PNV4 684 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 GSAPA4D1B5 854 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 CHADO15335 359 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 FOXH1O75593 365 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 PTBP3O95758 552 aaKnown RBP2.09□□□□□ -2.07
VPS13C-207ENST00000558919 P04436 131 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 CHTF8P0CG12 524 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 ICAM2P13598 275 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 GAP43P17677 238 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 TNNI3P19429 210 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 LONP1P36776 959 aaKnown RBP2.09□□□□□ -2.07
VPS13C-207ENST00000558919 TFPI2P48307 235 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 KPNA2P52292 529 aaKnown RBP2.09□□□□□ -2.07
VPS13C-207ENST00000558919 BIDP55957 195 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 SELENOTP62341 195 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 EWSR1Q01844 656 aaKnown RBP eCLIP2.09□□□□□ -2.07
VPS13C-207ENST00000558919 RIPK1Q13546 671 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 CCDC92Q53HC0 331 aaPredicted RBP2.09□□□□□ -2.07
VPS13C-207ENST00000558919 ATL3Q6DD88 541 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 C6orf120Q7Z4R8 191 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 ZSCAN30Q86W11 494 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 KIR3DL3Q8N743 410 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 CNNM3Q8NE01 707 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 OR10A7Q8NGE5 316 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 TSG101Q99816 390 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 CTRCQ99895 268 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 SLC35A5Q9BS91 424 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 RTBDNQ9BSG5 229 aaPredicted RBP2.09□□□□□ -2.07
VPS13C-207ENST00000558919 C1orf21Q9H246 121 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 RBAKQ9NYW8 714 aaPredicted RBP2.09□□□□□ -2.07
VPS13C-207ENST00000558919 STOX2Q9P2F5 926 aaPredicted RBP2.09□□□□□ -2.07
VPS13C-207ENST00000558919 TBK1Q9UHD2 729 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 PHF11Q9UIL8 331 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 TBX21Q9UL17 535 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 CHMP2BQ9UQN3 213 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 GSTK1Q9Y2Q3 226 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 ALG6Q9Y672 507 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 V9GY05 133 aa2.09□□□□□ -2.07
VPS13C-207ENST00000558919 SH3TC1Q8TE82 1336 aa2.09□□□□□ -2.08
VPS13C-207ENST00000558919 A0A1B0GUL7 405 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 KRT87PA6NCN2 255 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 F8WDY8 70 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 LAD1O00515 517 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 LANCL1O43813 399 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 PRPSAP2O60256 369 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 KIAA0754O94854 1291 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 MOSP00540 346 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 H2BFMP0C1H6 154 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 PNMA6AP0CW24 399 aaPredicted RBP2.08□□□□□ -2.08
VPS13C-207ENST00000558919 ZNF823P16415 610 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 MAPK3P27361 379 aaPredicted RBP2.08□□□□□ -2.08
VPS13C-207ENST00000558919 YWHABP31946 246 aaKnown RBP2.08□□□□□ -2.08
VPS13C-207ENST00000558919 LEPP41159 167 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 KIR2DS4P43632 304 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 KLK7P49862 253 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 AP3M2P53677 418 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 HSD17B7P56937 341 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 IL1RL1Q01638 556 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 TGFBR3Q03167 851 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 ZNF763Q0D2J5 394 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 MADCAM1Q13477 382 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 NSUN5P1Q3KNT7 163 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 C12orf60Q5U649 245 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 LRRC31Q6UY01 552 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 RALGPS2Q86X27 583 aaPredicted RBP2.08□□□□□ -2.08
VPS13C-207ENST00000558919 ZNF721Q8TF20 911 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 ST8SIA1Q92185 356 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 RAB7BQ96AH8 199 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 C12orf66Q96MD2 445 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 RHBGQ9H310 441 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 SMPD3Q9NY59 655 aaPredicted RBP2.08□□□□□ -2.08
VPS13C-207ENST00000558919 HOOK1Q9UJC3 728 aaKnown RBP2.08□□□□□ -2.08
VPS13C-207ENST00000558919 CLCA3PQ9Y6N3 262 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 PLEKHH1Q9ULM0 1364 aa2.08□□□□□ -2.08
VPS13C-207ENST00000558919 IGHV1OR21-1A0A087WYE8 117 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms