RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 PLEKHA6Q9Y2H5 1048 aa10.72□□□□□ -0.69
TPM1-216ENST00000558910 OTOGQ6ZRI0 2925 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 AGAP5A6NIR3 686 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 ENO4A6NNW6 628 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 SULT2B1O00204 365 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 EDF1O60869 148 aaKnown RBP10.71□□□□□ -0.69
TPM1-216ENST00000558910 CTAG2O75638 210 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 DBIP07108 87 aaKnown RBP10.71□□□□□ -0.69
TPM1-216ENST00000558910 FESP07332 822 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 ELK4P28324 431 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 AQP1P29972 269 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 MVDP53602 400 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 CRISP3P54108 245 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 EEF1A1P68104 462 aaKnown RBP10.71□□□□□ -0.69
TPM1-216ENST00000558910 GUCY1A3Q02108 690 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 BNIP2Q12982 314 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 GNA13Q14344 377 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 RGNQ15493 299 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 TMEM201Q5SNT2 666 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 C3orf33Q6P1S2 294 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 CDC20BQ86Y33 519 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 HRNRQ86YZ3 2850 aaPredicted RBP10.71□□□□□ -0.69
TPM1-216ENST00000558910 MSRB3Q8IXL7 192 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 C10orf111Q8N326 155 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 CLIP4Q8N3C7 705 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 PIK3IP1Q96FE7 263 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 TMEM120AQ9BXJ8 343 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 PIF1Q9H611 641 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 RASSF1Q9NS23 344 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 ACER3Q9NUN7 267 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 FGFR1OP2Q9NVK5 253 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 SLC25A37Q9NYZ2 338 aa10.71□□□□□ -0.69
TPM1-216ENST00000558910 ZNF443Q9Y2A4 671 aaPredicted RBP10.71□□□□□ -0.69
TPM1-216ENST00000558910 MAP1AP78559 2803 aaPredicted RBP10.7□□□□□ -0.7
TPM1-216ENST00000558910 A0A096LPI6 279 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 TMED7-TICAM2A0A0A6YYA0 188 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 TMEM72A0PK05 275 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 SS18L1O75177 396 aaPredicted RBP10.7□□□□□ -0.7
TPM1-216ENST00000558910 PRKD3O94806 890 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 CGAP01215 116 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 IGHV3-9P01782 118 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 CRHP06850 196 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 TFPTP0C1Z6 253 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 PRG2P13727 222 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 PTNP21246 168 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 TACR3P29371 465 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 AGTR1P30556 359 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 DIO1P49895 249 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 RASGEF1BQ0VAM2 473 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 LIN52Q52LA3 116 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 HSP90B2PQ58FF3 399 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 SYT14P1Q58G82 188 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 ZNF311Q5JNZ3 666 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 GCNT6Q5T4J0 391 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 MSANTD1Q6ZTZ1 278 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 WFDC8Q8IUA0 241 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 OR6K3Q8NGY3 331 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 ST8SIA1Q92185 356 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 CPNE4Q96A23 557 aaPredicted RBP10.7□□□□□ -0.7
TPM1-216ENST00000558910 ARL5BQ96KC2 179 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 ZNF300Q96RE9 604 aaPredicted RBP10.7□□□□□ -0.7
TPM1-216ENST00000558910 CCM2LQ9NUG4 571 aaPredicted RBP10.7□□□□□ -0.7
TPM1-216ENST00000558910 PAQR5Q9NXK6 330 aaPredicted RBP10.7□□□□□ -0.7
TPM1-216ENST00000558910 VAPAQ9P0L0 249 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 CHRNA9Q9UGM1 479 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 TMED7Q9Y3B3 224 aa10.7□□□□□ -0.7
TPM1-216ENST00000558910 CFAP73A6NFT4 308 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 C16orf97H3BN30 126 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 ANGPT2O15123 496 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 SMAD9O15198 467 aaKnown RBP10.69□□□□□ -0.7
TPM1-216ENST00000558910 PABPC4LP0CB38 370 aaKnown RBP10.69□□□□□ -0.7
TPM1-216ENST00000558910 ZCCHC18P0CG32 403 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 NID1P14543 1247 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 EDNRAP25101 427 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 DNAJA1P31689 397 aaKnown RBP10.69□□□□□ -0.7
TPM1-216ENST00000558910 CCKARP32238 428 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 UGT2B10P36537 528 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 ART1P52961 327 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 MTPNP58546 118 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 SORDQ00796 357 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 EPS8Q12929 822 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 SELPLGQ14242 412 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 CAPRIN1Q14444 709 aaKnown RBP10.69□□□□□ -0.7
TPM1-216ENST00000558910 LARS2Q15031 903 aaKnown RBP10.69□□□□□ -0.7
TPM1-216ENST00000558910 SLC25A53Q5H9E4 307 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 EEF1A1P5Q5VTE0 462 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 GTF2IRD2BQ6EKJ0 949 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 C22orf34Q6ZV56 151 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 GRINAQ7Z429 371 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 SERPINA11Q86U17 422 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 GTF2IRD2Q86UP8 949 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 CXorf67Q86X51 503 aaPredicted RBP10.69□□□□□ -0.7
TPM1-216ENST00000558910 ADGRG3Q86Y34 549 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 CCDC103Q8IW40 242 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 FAM71CQ8NEG0 241 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 RNF128Q8TEB7 428 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 CCDC106Q9BWC9 280 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 IKZF5Q9H5V7 419 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 PRSS50Q9UI38 385 aa10.69□□□□□ -0.7
TPM1-216ENST00000558910 OSGIN1Q9UJX0 560 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms