RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 UGT1A5P35504 534 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 MAGEA8P43361 318 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 LMO4P61968 165 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 OGDHQ02218 1023 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 BCL2L1Q07817 233 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 AANATQ16613 207 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 RABL6Q3YEC7 729 aaPredicted RBP3.31□□□□□ -1.88
CASC4-206ENST00000558847 BOLA3Q53S33 107 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 PRR30Q53SZ7 412 aaPredicted RBP3.31□□□□□ -1.88
CASC4-206ENST00000558847 C1orf220Q5T0J3 134 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 ZNF774Q6NX45 483 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 C17orf82Q86X59 251 aaPredicted RBP3.31□□□□□ -1.88
CASC4-206ENST00000558847 HPS6Q86YV9 775 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 CCDC65Q8IXS2 484 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 UBE2J2Q8N2K1 259 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 MRAPQ8TCY5 172 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 UBE2E3Q969T4 207 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 TUBGCP3Q96CW5 907 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 SERAC1Q96JX3 654 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 NPY6RQ99463 290 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 CNPY3Q9BT09 278 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 DEFB126Q9BYW3 111 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 MAGT1Q9H0U3 335 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 Q9H3A6 140 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 EHD1Q9H4M9 534 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 IKZF5Q9H5V7 419 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 AZI2Q9H6S1 392 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 POPDC2Q9HBU9 364 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 ZNF275Q9NSD4 429 aaPredicted RBP3.31□□□□□ -1.88
CASC4-206ENST00000558847 BFARQ9NZS9 450 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 ANGPTL2Q9UKU9 493 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 ERVW-1Q9UQF0 538 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 NPTNQ9Y639 398 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 IGHV1OR15-1A0A075B7D0 117 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 ZNF705EA8MWA4 302 aaPredicted RBP3.3□□□□□ -1.88
CASC4-206ENST00000558847 IDSB3KWA1 339 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 TNFSF11O14788 317 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 TIMM8AO60220 97 aaPredicted RBP3.3□□□□□ -1.88
CASC4-206ENST00000558847 ZNF254O75437 659 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 DIRAS1O95057 198 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 SLC2A3P11169 496 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 IGLL1P15814 213 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 FASP25445 335 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 IL12AP29459 219 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 GNA11P29992 359 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 RFC4P35249 363 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 ACTR3P61158 418 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 KLRB1Q12918 225 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 CUL1Q13616 776 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 EOGTQ5NDL2 527 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 RAPGEF5Q92565 580 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 NT5C3BQ969T7 300 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 ANKRD9Q96BM1 317 aaPredicted RBP3.3□□□□□ -1.88
CASC4-206ENST00000558847 CXorf40BQ96DE9 158 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 IFT74Q96LB3 600 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 CCNL2Q96S94 520 aaPredicted RBP3.3□□□□□ -1.88
CASC4-206ENST00000558847 CHIAQ9BZP6 476 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 NMUR2Q9GZQ4 415 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 VNN3Q9NY84 501 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 ONECUT1Q9UBC0 465 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 MEMO1Q9Y316 297 aa3.3□□□□□ -1.88
CASC4-206ENST00000558847 RPL36Q9Y3U8 105 aaKnown RBP3.3□□□□□ -1.88
CASC4-206ENST00000558847 COL2A1P02458 1487 aaPredicted RBP3.29□□□□□ -1.88
CASC4-206ENST00000558847 SH3TC1Q8TE82 1336 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 IQANK1A0A1B0GTG1 560 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 A0A1B0GVY2 172 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 OR52A4PA6NMU1 304 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 A8MXQ7 604 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 NBR2O15453 112 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 UGT1A9O60656 530 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 CCDC166P0CW27 439 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 POLR2EP19388 210 aaKnown RBP3.29□□□□□ -1.88
CASC4-206ENST00000558847 PSMB1P20618 241 aaKnown RBP3.29□□□□□ -1.88
CASC4-206ENST00000558847 PBLDP30039 288 aaPredicted RBP3.29□□□□□ -1.88
CASC4-206ENST00000558847 CALCRP30988 508 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 CCR1P32246 355 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 DUSP3P51452 185 aaPredicted RBP3.29□□□□□ -1.88
CASC4-206ENST00000558847 HSPA2P54652 639 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 PKNOX1P55347 436 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 KRTAP10-3P60369 221 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 CTSL3PQ5NE16 218 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 PDZK1Q5T2W1 519 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 CXCL17Q6UXB2 119 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 ZBED8Q8IZ13 594 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 CCDC71LQ8N9Z2 235 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 SCFD1Q8WVM8 642 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 DNAJA4Q8WW22 397 aaPredicted RBP3.29□□□□□ -1.88
CASC4-206ENST00000558847 FBXO32Q969P5 355 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 NEIL2Q969S2 332 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 C10orf35Q96D05 121 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 HAVCR1Q96D42 359 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 B3GALT6Q96L58 329 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 SLC38A2Q96QD8 506 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 REEP4Q9H6H4 257 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 YY1AP1Q9H869 796 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 ZNF702PQ9H963 129 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 SUN2Q9UH99 717 aa3.29□□□□□ -1.88
CASC4-206ENST00000558847 XKRY2A2RUG3 117 aa3.28□□□□□ -1.88
CASC4-206ENST00000558847 KIF2AO00139 706 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms