RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 ATG4DQ86TL0 474 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-207ENST00000558763 LNX2Q8N448 690 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 ANKK1Q8NFD2 765 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 C9orf43Q8TAL5 461 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-207ENST00000558763 SLC38A2Q96QD8 506 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 SPRY4Q9C004 299 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 MCCC2Q9HCC0 563 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 ASCL3Q9NQ33 180 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 HINT3Q9NQE9 182 aaKnown RBP11.83□□□□□ -0.52
SMAD3-207ENST00000558763 PADI1Q9ULC6 663 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 AHCTF1Q8WYP5 2266 aa11.82□□□□□ -0.52
SMAD3-207ENST00000558763 CDRT15L2A8MXV6 281 aa11.82□□□□□ -0.52
SMAD3-207ENST00000558763 STMND1H3BQB6 276 aa11.82□□□□□ -0.52
SMAD3-207ENST00000558763 FADS1O60427 444 aa11.82□□□□□ -0.52
SMAD3-207ENST00000558763 ZNF182P17025 639 aaPredicted RBP11.82□□□□□ -0.52
SMAD3-207ENST00000558763 GRK5P34947 590 aa11.82□□□□□ -0.52
SMAD3-207ENST00000558763 PNLIPRP2P54317 469 aa11.82□□□□□ -0.52
SMAD3-207ENST00000558763 NCF4Q15080 339 aa11.82□□□□□ -0.52
SMAD3-207ENST00000558763 TIGD6Q17RP2 521 aa11.82□□□□□ -0.52
SMAD3-207ENST00000558763 ZNF362Q5T0B9 420 aaPredicted RBP11.82□□□□□ -0.52
SMAD3-207ENST00000558763 HLA-DQA1Q5Y7H0 255 aa11.82□□□□□ -0.52
SMAD3-207ENST00000558763 PAPD4Q6PIY7 484 aaKnown RBP11.82□□□□□ -0.52
SMAD3-207ENST00000558763 C19orf48Q6RUI8 117 aa11.82□□□□□ -0.52
SMAD3-207ENST00000558763 SLC46A3Q7Z3Q1 461 aa11.82□□□□□ -0.52
SMAD3-207ENST00000558763 P2RY8Q86VZ1 359 aa11.82□□□□□ -0.52
SMAD3-207ENST00000558763 BBS1Q8NFJ9 593 aa11.82□□□□□ -0.52
SMAD3-207ENST00000558763 NLGN4YQ8NFZ3 816 aaPredicted RBP11.82□□□□□ -0.52
SMAD3-207ENST00000558763 OR52I1Q8NGK6 324 aa11.82□□□□□ -0.52
SMAD3-207ENST00000558763 DNAJA4Q8WW22 397 aaPredicted RBP11.82□□□□□ -0.52
SMAD3-207ENST00000558763 RPL3LQ92901 407 aaKnown RBP11.82□□□□□ -0.52
SMAD3-207ENST00000558763 TP53INP1Q96A56 240 aa11.82□□□□□ -0.52
SMAD3-207ENST00000558763 LGALS12Q96DT0 336 aa11.82□□□□□ -0.52
SMAD3-207ENST00000558763 BCL7BQ9BQE9 202 aa11.82□□□□□ -0.52
SMAD3-207ENST00000558763 WDR54Q9H977 334 aa11.82□□□□□ -0.52
SMAD3-207ENST00000558763 WDR70Q9NW82 654 aa11.82□□□□□ -0.52
SMAD3-207ENST00000558763 MRTO4Q9UKD2 239 aaKnown RBP11.82□□□□□ -0.52
SMAD3-207ENST00000558763 FRYQ5TBA9 3013 aa11.82□□□□□ -0.52
SMAD3-207ENST00000558763 EFCAB9A8MZ26 197 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 B4DXG7 233 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 LRRN3E7EW58 273 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 GNB5O14775 395 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 RAD1O60671 282 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 WISP1O95388 367 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 NADKO95544 446 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-207ENST00000558763 TCN2P20062 427 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 IL12BP29460 328 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 ROR2Q01974 943 aaKnown RBP11.81□□□□□ -0.52
SMAD3-207ENST00000558763 CRYZQ08257 329 aaKnown RBP11.81□□□□□ -0.52
SMAD3-207ENST00000558763 WBP2NLQ6ICG8 309 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 SMARCD3Q6STE5 483 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 PAQR6Q6TCH4 344 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 ZNF367Q7RTV3 350 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 CPEB2Q7Z5Q1 589 aaKnown RBP11.81□□□□□ -0.52
SMAD3-207ENST00000558763 ESX1Q8N693 406 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 NUBPLQ8TB37 319 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 CT55Q8WUE5 264 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 C8orf44Q96CB5 159 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 TMEM80Q96HE8 168 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 CRB3Q9BUF7 120 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 SCNM1Q9BWG6 230 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 LAT2Q9GZY6 243 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 DIMT1Q9UNQ2 313 aaKnown RBP11.81□□□□□ -0.52
SMAD3-207ENST00000558763 TRABD2BA6NFA1 517 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 OR6C70A6NIJ9 312 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 CYC1P08574 325 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 SAGP10523 405 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-207ENST00000558763 HPGDP15428 266 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 CD36P16671 472 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 SH3BGRP55822 239 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-207ENST00000558763 EGR4Q05215 589 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 RPL13AP3Q6NVV1 102 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 MARCH3Q86UD3 253 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 OR51A7Q8NH64 312 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 RNF138Q8WVD3 245 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 CRELD1Q96HD1 420 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 TNFRSF13CQ96RJ3 184 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 TAPBPLQ9BX59 468 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 PRRG3Q9BZD7 231 aa11.81□□□□□ -0.52
SMAD3-207ENST00000558763 FGF20Q9NP95 211 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-207ENST00000558763 PTRH2Q9Y3E5 179 aaKnown RBP11.81□□□□□ -0.52
SMAD3-207ENST00000558763 ZFHX4Q86UP3 3567 aa11.8□□□□□ -0.52
SMAD3-207ENST00000558763 NOL3O60936 208 aaKnown RBP11.8□□□□□ -0.52
SMAD3-207ENST00000558763 KLF7O75840 302 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-207ENST00000558763 RCBTB2O95199 551 aa11.8□□□□□ -0.52
SMAD3-207ENST00000558763 UMODP07911 640 aa11.8□□□□□ -0.52
SMAD3-207ENST00000558763 EVI2BP34910 448 aa11.8□□□□□ -0.52
SMAD3-207ENST00000558763 ID4P47928 161 aa11.8□□□□□ -0.52
SMAD3-207ENST00000558763 SLC26A5P58743 744 aa11.8□□□□□ -0.52
SMAD3-207ENST00000558763 RPS18P62269 152 aaKnown RBP11.8□□□□□ -0.52
SMAD3-207ENST00000558763 RPS4XP62701 263 aaKnown RBP11.8□□□□□ -0.52
SMAD3-207ENST00000558763 DBPQ10586 325 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-207ENST00000558763 TOMM34Q15785 309 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-207ENST00000558763 ATCAYQ86WG3 371 aa11.8□□□□□ -0.52
SMAD3-207ENST00000558763 LRRC17Q8N6Y2 441 aa11.8□□□□□ -0.52
SMAD3-207ENST00000558763 METTL21AQ8WXB1 218 aa11.8□□□□□ -0.52
SMAD3-207ENST00000558763 NXPE2Q96DL1 559 aa11.8□□□□□ -0.52
SMAD3-207ENST00000558763 VMP1Q96GC9 406 aa11.8□□□□□ -0.52
SMAD3-207ENST00000558763 OPALINQ96PE5 141 aa11.8□□□□□ -0.52
SMAD3-207ENST00000558763 CCNL2Q96S94 520 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-207ENST00000558763 ZNF649Q9BS31 505 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms