RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 HRO43593 1189 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 TRAPPC6AO75865 159 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 PTBP3O95758 552 aaKnown RBP3.45□□□□□ -1.86
ATXN3-248ENST00000558190 SEMG1P04279 462 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 MLF1P58340 268 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 KRTDAPP60985 99 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 HEPHL1Q6MZM0 1159 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM207Q6UWW9 146 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 FAM46AQ96IP4 442 aaKnown RBP3.45□□□□□ -1.86
ATXN3-248ENST00000558190 RNF170Q96K19 258 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 FZD1Q9UP38 647 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 DOK2O60496 412 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 ELFN1P0C7U0 828 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 GNB3P16520 340 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 GHRHRQ02643 423 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 ADAP2Q9NPF8 381 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 KLK11Q9UBX7 282 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 A0A1W2PPV4 95 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 HPXP02790 462 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 EBPQ15125 230 aaKnown RBP3.45□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF417Q8TAU3 575 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 FNDC9Q8TBE3 224 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 IMP4Q96G21 291 aaKnown RBP3.45□□□□□ -1.86
ATXN3-248ENST00000558190 TESQ9UGI8 421 aaKnown RBP3.45□□□□□ -1.86
ATXN3-248ENST00000558190 XKRY2A2RUG3 117 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 ACOD1A6NK06 481 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 KDM4EB2RXH2 506 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-248ENST00000558190 TAAR5O14804 337 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 SNRNP200O75643 2136 aaKnown RBP3.45□□□□□ -1.86
ATXN3-248ENST00000558190 ACP2P11117 423 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 GPX2P18283 190 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 FABP5Q01469 135 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 PLA1AQ53H76 456 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 LCN15Q6UWW0 184 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 LRRC28Q86X40 367 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-248ENST00000558190 BVESQ8NE79 360 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 DUSP18Q8NEJ0 188 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 OR4K17Q8NGC6 315 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 OR14A16Q8NHC5 309 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 C2orf50Q96LR7 162 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 OR11A1Q9GZK7 315 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 TINAGL1Q9GZM7 467 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-248ENST00000558190 CHST6Q9GZX3 395 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM82A0PJX8 343 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 A6NIZ1 184 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 CLEC3AO75596 197 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 CMPK1P30085 196 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 RAP1BP61224 184 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 PKIAP61925 76 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 SLC16A12Q6ZSM3 486 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM169Q96HH4 297 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 CNN2Q99439 309 aaKnown RBP3.45□□□□□ -1.86
ATXN3-248ENST00000558190 MSTNO14793 375 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 PNMTP11086 282 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 RASGEF1BQ0VAM2 473 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 Q5BKY6 102 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 LINC00052Q96N35 136 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 SPSB2Q99619 263 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 OPA3Q9H6K4 179 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF442Q9H7R0 627 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 RDH14Q9HBH5 336 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 RTCAO00442 366 aaKnown RBP3.45□□□□□ -1.86
ATXN3-248ENST00000558190 TAS2R31P59538 309 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF280AP59817 542 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF587Q96SQ5 575 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-248ENST00000558190 ASAH2Q9NR71 780 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 BTNL2Q9UIR0 455 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 RCE1Q9Y256 329 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 KPTNQ9Y664 436 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 SOWAHBA6NEL2 793 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 XRCC3O43542 346 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 PMS2P2O95744 297 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 NDUFB7P17568 137 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 RAB5AP20339 215 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 EPHA5P54756 1037 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 EXOSC6Q5RKV6 272 aaKnown RBP3.45□□□□□ -1.86
ATXN3-248ENST00000558190 BRICD5Q6PL45 260 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 DPY19L4Q7Z388 723 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 CPXM2Q8N436 756 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 IL19Q9UHD0 177 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 PLEKHM1Q9Y4G2 1056 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 ITSN2Q9NZM3 1697 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 CDHR4A6H8M9 788 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 F2P00734 622 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 SNHG28P0DPA3 235 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 LIMK1P53667 647 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 HABP2Q14520 560 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-248ENST00000558190 LPCAT3Q6P1A2 487 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF66Q6ZN08 573 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 CBLL1Q75N03 491 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 IL22RA1Q8N6P7 574 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 OR1S1Q8NH92 325 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 MIB2Q96AX9 1013 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 INTS14Q96SY0 518 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 NICN1Q9BSH3 213 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 ABHD16BQ9H3Z7 469 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 DEC1Q9P2X7 70 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 MSRAQ9UJ68 235 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 SLC7A11Q9UPY5 501 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 FBXO7Q9Y3I1 522 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms