RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 DAPP51397 102 aa15.29■□□□□ 0.04
SNX1-203ENST00000558040 PLGLB1Q02325 96 aa15.29■□□□□ 0.04
SNX1-203ENST00000558040 FOXO1Q12778 655 aa15.29■□□□□ 0.04
SNX1-203ENST00000558040 TOMM20Q15388 145 aa15.29■□□□□ 0.04
SNX1-203ENST00000558040 GLYR1Q49A26 553 aaPredicted RBP15.29■□□□□ 0.04
SNX1-203ENST00000558040 C1orf94Q6P1W5 598 aa15.29■□□□□ 0.04
SNX1-203ENST00000558040 POMZP3Q6PJE2 187 aa15.29■□□□□ 0.04
SNX1-203ENST00000558040 C5orf46Q6UWT4 87 aa15.29■□□□□ 0.04
SNX1-203ENST00000558040 ZNF524Q96C55 264 aa15.29■□□□□ 0.04
SNX1-203ENST00000558040 ZNF184Q99676 751 aaPredicted RBP15.29■□□□□ 0.04
SNX1-203ENST00000558040 PAPOLBQ9NRJ5 636 aaKnown RBP15.29■□□□□ 0.04
SNX1-203ENST00000558040 CHRNA9Q9UGM1 479 aa15.29■□□□□ 0.04
SNX1-203ENST00000558040 MRPS18CQ9Y3D5 142 aaKnown RBP15.29■□□□□ 0.04
SNX1-203ENST00000558040 URB1O60287 2271 aaKnown RBP15.28■□□□□ 0.04
SNX1-203ENST00000558040 PINLYPA6NC86 204 aa15.28■□□□□ 0.04
SNX1-203ENST00000558040 ACOT7O00154 380 aa15.28■□□□□ 0.04
SNX1-203ENST00000558040 KPNA4O00629 521 aaPredicted RBP15.28■□□□□ 0.04
SNX1-203ENST00000558040 SUSD5O60279 629 aa15.28■□□□□ 0.04
SNX1-203ENST00000558040 PIP5K1CO60331 668 aa15.28■□□□□ 0.04
SNX1-203ENST00000558040 IGF2P01344 180 aa15.28■□□□□ 0.04
SNX1-203ENST00000558040 IFI30P13284 250 aa15.28■□□□□ 0.04
SNX1-203ENST00000558040 FKBP2P26885 142 aaKnown RBP15.28■□□□□ 0.04
SNX1-203ENST00000558040 ELK4P28324 431 aa15.28■□□□□ 0.04
SNX1-203ENST00000558040 OMPP47874 163 aa15.28■□□□□ 0.04
SNX1-203ENST00000558040 AQP4P55087 323 aa15.28■□□□□ 0.04
SNX1-203ENST00000558040 CTBP2P56545 445 aa15.28■□□□□ 0.04
SNX1-203ENST00000558040 IL1RL1Q01638 556 aa15.28■□□□□ 0.04
SNX1-203ENST00000558040 PRKCDQ05655 676 aa15.28■□□□□ 0.04
SNX1-203ENST00000558040 COX10Q12887 443 aa15.28■□□□□ 0.04
SNX1-203ENST00000558040 ZER1Q7Z7L7 766 aa15.28■□□□□ 0.04
SNX1-203ENST00000558040 ADGRG3Q86Y34 549 aa15.28■□□□□ 0.04
SNX1-203ENST00000558040 GTPBP8Q8N3Z3 284 aaPredicted RBP15.28■□□□□ 0.04
SNX1-203ENST00000558040 GTPBP3Q969Y2 492 aaKnown RBP15.28■□□□□ 0.04
SNX1-203ENST00000558040 FAM46AQ96IP4 442 aaKnown RBP15.28■□□□□ 0.04
SNX1-203ENST00000558040 PIGQQ9BRB3 760 aa15.28■□□□□ 0.04
SNX1-203ENST00000558040 TTTY12Q9BZ98 90 aa15.28■□□□□ 0.04
SNX1-203ENST00000558040 UCK2Q9BZX2 261 aa15.28■□□□□ 0.04
SNX1-203ENST00000558040 ACACAQ13085 2346 aa15.28■□□□□ 0.04
SNX1-203ENST00000558040 EML6Q6ZMW3 1958 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 A8MVM7 634 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 ZNF208O43345 1280 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 POU2F1P14859 743 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 CCNA2P20248 432 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 PTNP21246 168 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 FPR3P25089 353 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 ALDH6A1Q02252 535 aaKnown RBP15.27■□□□□ 0.04
SNX1-203ENST00000558040 CRYZQ08257 329 aaKnown RBP15.27■□□□□ 0.04
SNX1-203ENST00000558040 TSPAN31Q12999 210 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 SELENBP1Q13228 472 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 HYAL4Q2M3T9 481 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 RAET1LQ5VY80 246 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 C3orf33Q6P1S2 294 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 CD300LDQ6UXZ3 194 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 PRICKLE2Q7Z3G6 844 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 SLC22A16Q86VW1 577 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 KDF1Q8NAX2 398 aaPredicted RBP15.27■□□□□ 0.04
SNX1-203ENST00000558040 ZFP62Q8NB50 900 aaPredicted RBP15.27■□□□□ 0.04
SNX1-203ENST00000558040 OR14L1PQ8NHC6 308 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 PFN4Q8NHR9 129 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 STK35Q8TDR2 534 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 SLC25A43Q8WUT9 341 aaPredicted RBP15.27■□□□□ 0.04
SNX1-203ENST00000558040 EXTL1Q92935 676 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 DDIT4LQ96D03 193 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 BPIFA2Q96DR5 249 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 SGTBQ96EQ0 304 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 NIPSNAP1Q9BPW8 284 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 OR2B2Q9GZK3 357 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 UBQLN3Q9H347 655 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 ZNF703Q9H7S9 590 aaPredicted RBP15.27■□□□□ 0.04
SNX1-203ENST00000558040 MEPEQ9NQ76 525 aaPredicted RBP15.27■□□□□ 0.04
SNX1-203ENST00000558040 QPCTLQ9NXS2 382 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 TMEFF2Q9UIK5 374 aaPredicted RBP15.27■□□□□ 0.04
SNX1-203ENST00000558040 CSAG2Q9Y5P2 127 aa15.27■□□□□ 0.04
SNX1-203ENST00000558040 IGKV1D-42A0A075B6H8 117 aa15.26■□□□□ 0.03
SNX1-203ENST00000558040 TMEM72A0PK05 275 aa15.26■□□□□ 0.03
SNX1-203ENST00000558040 ENO4A6NNW6 628 aa15.26■□□□□ 0.03
SNX1-203ENST00000558040 ZIC3O60481 467 aa15.26■□□□□ 0.03
SNX1-203ENST00000558040 TRAPPC6AO75865 159 aa15.26■□□□□ 0.03
SNX1-203ENST00000558040 TCEA1P23193 301 aaKnown RBP15.26■□□□□ 0.03
SNX1-203ENST00000558040 GPR4P46093 362 aa15.26■□□□□ 0.03
SNX1-203ENST00000558040 GSSP48637 474 aa15.26■□□□□ 0.03
SNX1-203ENST00000558040 LSM11P83369 360 aaKnown RBP eCLIP15.26■□□□□ 0.03
SNX1-203ENST00000558040 ZNF169Q14929 603 aaPredicted RBP15.26■□□□□ 0.03
SNX1-203ENST00000558040 ANKRD34AQ69YU3 496 aa15.26■□□□□ 0.03
SNX1-203ENST00000558040 TMPRSS11FQ6ZWK6 438 aa15.26■□□□□ 0.03
SNX1-203ENST00000558040 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.26■□□□□ 0.03
SNX1-203ENST00000558040 GALNT5Q7Z7M9 940 aa15.26■□□□□ 0.03
SNX1-203ENST00000558040 PARP8Q8N3A8 854 aa15.26■□□□□ 0.03
SNX1-203ENST00000558040 POC1BQ8TC44 478 aa15.26■□□□□ 0.03
SNX1-203ENST00000558040 RPH3AQ9Y2J0 694 aaPredicted RBP15.26■□□□□ 0.03
SNX1-203ENST00000558040 TRAV36DV7A0A075B6V5 113 aa15.25■□□□□ 0.03
SNX1-203ENST00000558040 EFCAB9A8MZ26 197 aa15.25■□□□□ 0.03
SNX1-203ENST00000558040 LINC01387J3KSC0 135 aa15.25■□□□□ 0.03
SNX1-203ENST00000558040 GLSO94925 669 aaPredicted RBP15.25■□□□□ 0.03
SNX1-203ENST00000558040 AHSA1O95433 338 aa15.25■□□□□ 0.03
SNX1-203ENST00000558040 SNAP29O95721 258 aa15.25■□□□□ 0.03
SNX1-203ENST00000558040 RFPL3SP0C7P2 107 aa15.25■□□□□ 0.03
SNX1-203ENST00000558040 SAGP10523 405 aaPredicted RBP15.25■□□□□ 0.03
SNX1-203ENST00000558040 TAF11Q15544 211 aa15.25■□□□□ 0.03
SNX1-203ENST00000558040 TMEM44Q2T9K0 475 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms