RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 T-ENOLP0DO92 83 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 ETFAP13804 333 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 PGCP20142 388 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 CRYGSP22914 178 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 LOXP28300 417 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-224ENST00000556737 MAGEA8P43361 318 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 ANXA11P50995 505 aaKnown RBP9.2□□□□□ -0.94
SHMT2-224ENST00000556737 ART1P52961 327 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 CTBP2P56545 445 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 SLC25A3Q00325 362 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 MERTKQ12866 999 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 NFYCQ13952 458 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 EXOC3L2Q2M3D2 409 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 ABLIM2Q6H8Q1 611 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 SLC2A7Q6PXP3 512 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 C16orf89Q6UX73 402 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 TFAP2EQ6VUC0 442 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 STAC2Q6ZMT1 411 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 FCRLAQ7L513 359 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 ZNF550Q7Z398 422 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 FUNDC1Q8IVP5 155 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 MSRB3Q8IXL7 192 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 ATP6V1C2Q8NEY4 427 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 WDR60Q8WVS4 1066 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 GTF2H4Q92759 462 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 PSD2Q9BQI7 771 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 RMND5AQ9H871 391 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 SLC52A3Q9NQ40 469 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 CTPS2Q9NRF8 586 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 CCM2LQ9NUG4 571 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-224ENST00000556737 GID8Q9NWU2 228 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 NDE1Q9NXR1 346 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 C6orf203Q9P0P8 240 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-224ENST00000556737 PLEKHA6Q9Y2H5 1048 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 AKAP6Q13023 2319 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 MPDZO75970 2070 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 A0A1W2PP18 115 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 C16orf97H3BN30 126 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 GCM2O75603 506 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-224ENST00000556737 ATE1O95260 518 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 BCHEP06276 602 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 TFPTP0C1Z6 253 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 NR2F1P10589 423 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 ENPP1P22413 925 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 SLC7A1P30825 629 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 RAC3P60763 192 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 DSTNP60981 165 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 KCNJ10P78508 379 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 RNPS1Q15287 305 aaKnown RBP9.19□□□□□ -0.94
SHMT2-224ENST00000556737 DNAL1Q4LDG9 190 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 SYT14P1Q58G82 188 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 RPS26P11Q5JNZ5 115 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-224ENST00000556737 MRPL2Q5T653 305 aaKnown RBP9.19□□□□□ -0.94
SHMT2-224ENST00000556737 ZNF836Q6ZNA1 936 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 NUFIP2Q7Z417 695 aaKnown RBP9.19□□□□□ -0.94
SHMT2-224ENST00000556737 GRINAQ7Z429 371 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 TUSC5Q8IXB3 177 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 CMIPQ8IY22 773 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 ARHGAP24Q8N264 748 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 RBM15BQ8NDT2 890 aaKnown RBP9.19□□□□□ -0.94
SHMT2-224ENST00000556737 TMEM234Q8WY98 164 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 MBD6Q96DN6 1003 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 ITCHQ96J02 903 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 OR5B2Q96R09 309 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 FOXC2Q99958 501 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 SLC39A3Q9BRY0 314 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 BTBD10Q9BSF8 475 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 C12orf49Q9H741 205 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 TPT1P8Q9HAU6 139 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 BCO1Q9HAY6 547 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 GP6Q9HCN6 339 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 TIGARQ9NQ88 270 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-224ENST00000556737 TMEM45AQ9NWC5 275 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 SLC25A37Q9NYZ2 338 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 P2RX2Q9UBL9 471 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-224ENST00000556737 CHRNA9Q9UGM1 479 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 NDRG3Q9UGV2 375 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 PCDHB14Q9Y5E9 798 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 ABCA4P78363 2273 aa9.19□□□□□ -0.94
SHMT2-224ENST00000556737 A0A096LPI6 279 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 TRBV5-3A0A0A0MS03 114 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 CDHR4A6H8M9 788 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 FAAHO00519 579 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 FBP2O00757 339 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 CYTIPO60759 359 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 RAF1P04049 648 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 DBIP07108 87 aaKnown RBP9.18□□□□□ -0.94
SHMT2-224ENST00000556737 FESP07332 822 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 NUDT7P0C024 238 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 PABPC4LP0CB38 370 aaKnown RBP9.18□□□□□ -0.94
SHMT2-224ENST00000556737 BMP2P12643 396 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 EDNRAP25101 427 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 RYKP34925 604 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 APOBEC1P41238 236 aaKnown RBP9.18□□□□□ -0.94
SHMT2-224ENST00000556737 CRATP43155 626 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 KCNJ5P48544 419 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 DIO1P49895 249 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 EPS8Q12929 822 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms