RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 TMED7-TICAM2A0A0A6YYA0 188 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 TRGV5A0A0B4J1U4 118 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 ELOA3DA6NLF2 546 aaPredicted RBP10.17□□□□□ -0.78
FOXN3-212ENST00000556541 FAM166BA8MTA8 275 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 A8MVM7 634 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 ANKRD65E5RJM6 399 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 MGRN1O60291 552 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 GADD45GO95257 159 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 LDLRP01130 860 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 CPN1P15169 458 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 FPR1P21462 350 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 CXCR1P25024 350 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 RNF144AP50876 292 aaPredicted RBP10.17□□□□□ -0.78
FOXN3-212ENST00000556541 TDGF1P3P51864 188 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 CTBP2P56545 445 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 HOXC5Q00444 222 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 MFSD13AQ14CX5 517 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 ELOA3BQ3SY89 546 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 RAET1LQ5VY80 246 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 ARHGAP11AQ6P4F7 1023 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 GHDCQ8N2G8 530 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 CADM2Q8N3J6 435 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 ELOA3Q8NG57 546 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 OR4C15Q8NGM1 316 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 PYDC1Q8WXC3 89 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 DDIT4LQ96D03 193 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 SFXN2Q96NB2 322 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 REEP1Q9H902 201 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 CTPS2Q9NRF8 586 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 C6orf203Q9P0P8 240 aaPredicted RBP10.17□□□□□ -0.78
FOXN3-212ENST00000556541 SLC7A7Q9UM01 511 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 TRAPPC4Q9Y296 219 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 NTNG1Q9Y2I2 539 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 TMED7Q9Y3B3 224 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 SPTA1P02549 2419 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 BSNQ9UPA5 3926 aa10.17□□□□□ -0.78
FOXN3-212ENST00000556541 GTF3C1Q12789 2109 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 SH3PXD2BA1X283 911 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 J3KTA2 159 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 OR2T1O43869 369 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 EFNA2O43921 213 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 TRAPPC6AO75865 159 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 EDN3P14138 238 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 ZNF708P17019 499 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 RRM2P31350 389 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 DNAJA1P31689 397 aaKnown RBP10.16□□□□□ -0.78
FOXN3-212ENST00000556541 LHX2P50458 406 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 PMP22Q01453 160 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 SPIBQ01892 262 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 EGR4Q05215 589 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 CRYZQ08257 329 aaKnown RBP10.16□□□□□ -0.78
FOXN3-212ENST00000556541 ZNF239Q16600 458 aaKnown RBP10.16□□□□□ -0.78
FOXN3-212ENST00000556541 ANKDD1AQ495B1 522 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 SYT14P1Q58G82 188 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 WIPI1Q5MNZ9 446 aaPredicted RBP10.16□□□□□ -0.78
FOXN3-212ENST00000556541 DCST1Q5T197 706 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 SHQ1Q6PI26 577 aaKnown RBP10.16□□□□□ -0.78
FOXN3-212ENST00000556541 TTC33Q6PID6 262 aaPredicted RBP10.16□□□□□ -0.78
FOXN3-212ENST00000556541 ESPNLQ6ZVH7 1005 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 MBOAT2Q6ZWT7 520 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 YRDCQ86U90 279 aaKnown RBP10.16□□□□□ -0.78
FOXN3-212ENST00000556541 PM20D2Q8IYS1 436 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 PQLC1Q8N2U9 271 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 SVOPLQ8N434 492 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 SLC7A13Q8TCU3 470 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 TMEM239Q8WW34 195 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 DNAJC9Q8WXX5 260 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 SARAFQ96BY9 339 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 ADGRG7Q96K78 797 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 UCN2Q96RP3 112 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 KLHL4Q9C0H6 718 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 PRDM14Q9GZV8 571 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 NTN4Q9HB63 628 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 KRCC1Q9NPI7 259 aaPredicted RBP10.16□□□□□ -0.78
FOXN3-212ENST00000556541 C8orf4Q9NR00 106 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 STX18Q9P2W9 335 aaKnown RBP10.16□□□□□ -0.78
FOXN3-212ENST00000556541 TMEM5Q9Y2B1 443 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 RRP15Q9Y3B9 282 aaKnown RBP10.16□□□□□ -0.78
FOXN3-212ENST00000556541 SHANK1Q9Y566 2161 aa10.16□□□□□ -0.78
FOXN3-212ENST00000556541 IGKV1D-42A0A075B6H8 117 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 TRAV36DV7A0A075B6V5 113 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 A0A087WUU8 490 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 TMEM72A0PK05 275 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 H0YHG0 523 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 TNFRSF11BO00300 401 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 BCKDKO14874 412 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 TIPRLO75663 272 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 PMS2P2O95744 297 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 MT-ATP6P00846 226 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 MT-ND1P03886 318 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 HOXD4P09016 255 aaPredicted RBP10.15□□□□□ -0.78
FOXN3-212ENST00000556541 CELA3AP09093 270 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 BMP7P18075 431 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 PTGER4P35408 488 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 IFNGR2P38484 337 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 RFC3P40938 356 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 ARHGDIAP52565 204 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 CLDN18P56856 261 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 PRKCDQ05655 676 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 LY6DQ14210 128 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms