RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 CTBP2P56545 445 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 RAC3P60763 192 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 EPS8Q12929 822 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 SNTB1Q13884 538 aaKnown RBP10.31□□□□□ -0.76
SLIRP-205ENST00000556310 LARS2Q15031 903 aaKnown RBP10.31□□□□□ -0.76
SLIRP-205ENST00000556310 RNPS1Q15287 305 aaKnown RBP10.31□□□□□ -0.76
SLIRP-205ENST00000556310 SYT14P1Q58G82 188 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 DLEU7Q6UYE1 221 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 VRK2Q86Y07 508 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 ZZZ3Q8IYH5 903 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 MAL2Q969L2 176 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 REXO5Q96IC2 774 aaKnown RBP10.31□□□□□ -0.76
SLIRP-205ENST00000556310 OR5B2Q96R09 309 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 IKZF5Q9H5V7 419 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 CTPS2Q9NRF8 586 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 CLEC4AQ9UMR7 237 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 PROCRQ9UNN8 238 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 IFT52Q9Y366 437 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 SPG11Q96JI7 2443 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 OTOGQ6ZRI0 2925 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 A0A1W2PNR3 127 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 A6NJY4 79 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 EVPLLA8MZ36 301 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 PGM3O95394 542 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 ETS2P15036 469 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 GPX2P18283 190 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 FKBP2P26885 142 aaKnown RBP10.3□□□□□ -0.76
SLIRP-205ENST00000556310 AGTR1P30556 359 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 MDH1P40925 334 aaKnown RBP10.3□□□□□ -0.76
SLIRP-205ENST00000556310 IDH2P48735 452 aaKnown RBP10.3□□□□□ -0.76
SLIRP-205ENST00000556310 POLR2HP52434 150 aaKnown RBP10.3□□□□□ -0.76
SLIRP-205ENST00000556310 SWI5Q1ZZU3 235 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 GTF2IRD2BQ6EKJ0 949 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 ZNF474Q6S9Z5 364 aaPredicted RBP10.3□□□□□ -0.76
SLIRP-205ENST00000556310 FCRLAQ7L513 359 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 ZNF550Q7Z398 422 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 GTF2IRD2Q86UP8 949 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 C10orf111Q8N326 155 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 SLC43A2Q8N370 569 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 NFKBIDQ8NI38 313 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 ABHD3Q8WU67 409 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 ROBO4Q8WZ75 1007 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 SPATA9Q9BWV2 254 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 OPN3Q9H1Y3 402 aaPredicted RBP10.3□□□□□ -0.76
SLIRP-205ENST00000556310 TMEM38AQ9H6F2 299 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 ARMC7Q9H6L4 198 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 GP6Q9HCN6 339 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 RLIMQ9NVW2 624 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 KLHL14Q9P2G3 628 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 KLHL13Q9P2N7 655 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 PRDM4Q9UKN5 801 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 ZNF232Q9UNY5 417 aa10.3□□□□□ -0.76
SLIRP-205ENST00000556310 DNPH1O43598 174 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 GOSR1O95249 250 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 CCKARP32238 428 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 CD79BP40259 229 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 SLC1A3P43003 542 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 CLK1P49759 484 aaKnown RBP10.29□□□□□ -0.76
SLIRP-205ENST00000556310 DIO1P49895 249 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 MAP2K6P52564 334 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 KRTAP10-9P60411 292 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 CSNK2A1P68400 391 aaPredicted RBP10.29□□□□□ -0.76
SLIRP-205ENST00000556310 CDK6Q00534 326 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 NFYCQ13952 458 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 RUNDC3AQ59EK9 446 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 ZNF311Q5JNZ3 666 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 REEP3Q6NUK4 255 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 TMPPEQ6ZT21 453 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 TMEM200AQ86VY9 491 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 ADGRG3Q86Y34 549 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 KRT73Q86Y46 540 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 SLC35B4Q969S0 331 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 ANKRD27Q96NW4 1050 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 DACH2Q96NX9 599 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 ZNF317Q96PQ6 595 aaPredicted RBP10.29□□□□□ -0.76
SLIRP-205ENST00000556310 CGREF1Q99674 301 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 SLC39A3Q9BRY0 314 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 TACO1Q9BSH4 297 aaKnown RBP10.29□□□□□ -0.76
SLIRP-205ENST00000556310 ELOVL5Q9NYP7 299 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 KLHL9Q9P2J3 617 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 OSGIN1Q9UJX0 560 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 HDGFL3Q9Y3E1 203 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 CHST2Q9Y4C5 530 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 ABCA4P78363 2273 aa10.29□□□□□ -0.76
SLIRP-205ENST00000556310 FREM1Q5H8C1 2179 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 AKAP9Q99996 3911 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 TMED7-TICAM2A0A0A6YYA0 188 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 FAM221AA4D161 298 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 SH3D21A4FU49 640 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 A6NNC1 897 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 BBIP1A8MTZ0 92 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 SULT2B1O00204 365 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 SMAD9O15198 467 aaKnown RBP10.28□□□□□ -0.76
SLIRP-205ENST00000556310 ZNF208O43345 1280 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 CYTIPO60759 359 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 CTAG2O75638 210 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 PRKD3O94806 890 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 PMS2P2O95744 297 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 FESP07332 822 aa10.28□□□□□ -0.76
SLIRP-205ENST00000556310 GKN3PP0CG01 181 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms