RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 SPTBN4Q9H254 2564 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 ELOA3DA6NLF2 546 aaPredicted RBP13.44□□□□□ -0.26
VPS33B-205ENST00000556096 SLC22A1O15245 554 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 CEACAM1P13688 526 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 SLC6A6P31641 620 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 SLC1A3P43003 542 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 MTNR1AP48039 350 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 CCR4P51679 360 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 MLLT10P55197 1068 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 E2F1Q01094 437 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 INSM1Q01101 510 aaPredicted RBP13.44□□□□□ -0.26
VPS33B-205ENST00000556096 ROR2Q01974 943 aaKnown RBP13.44□□□□□ -0.26
VPS33B-205ENST00000556096 ELOA3BQ3SY89 546 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 C3orf38Q5JPI3 329 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 NUP54Q7Z3B4 507 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 SLC46A3Q7Z3Q1 461 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 MISPQ8IVT2 679 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 NANOGP1Q8N7R0 232 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 PROKR2Q8NFJ6 384 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 ELOA3Q8NG57 546 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 OR51A7Q8NH64 312 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 LGALS12Q96DT0 336 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 TNFRSF13CQ96RJ3 184 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 DCUN1D5Q9BTE7 237 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 IFT27Q9BW83 186 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 ULBP3Q9BZM4 244 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 MCCC2Q9HCC0 563 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 CMC2Q9NRP2 79 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 DLL3Q9NYJ7 618 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 TRAV27A0A087WT01 109 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 TRBV11-1A0A0K0K1C0 115 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 TMEM200CA6NKL6 621 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 C9J4A7 227 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 TMX2-CTNND1H3BSU7 103 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 HCRTR2O43614 444 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 ZFAND5O76080 213 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 OR7A10O76100 309 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 HTR1FP30939 366 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 EVI2BP34910 448 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 CDH11P55287 796 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 FOXK2Q01167 660 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 AQP6Q13520 282 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 ARMCX4Q5H9R4 360 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 FAM198BQ6UWH4 519 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 GID4Q8IVV7 300 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 OR5W2Q8NH69 310 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 LIPHQ8WWY8 451 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 MR1Q95460 341 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 RNFT2Q96EX2 444 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 MND1Q9BWT6 205 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 ZBTB20Q9HC78 741 aaPredicted RBP13.43□□□□□ -0.26
VPS33B-205ENST00000556096 TIMMDC1Q9NPL8 285 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 HINT3Q9NQE9 182 aaKnown RBP13.43□□□□□ -0.26
VPS33B-205ENST00000556096 TAS2R16Q9NYV7 291 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 H2AFY2Q9P0M6 372 aaPredicted RBP13.43□□□□□ -0.26
VPS33B-205ENST00000556096 LSM2Q9Y333 95 aaKnown RBP13.43□□□□□ -0.26
VPS33B-205ENST00000556096 HEATR5AQ86XA9 2040 aa13.43□□□□□ -0.26
VPS33B-205ENST00000556096 IGKV1D-42A0A075B6H8 117 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 M0R3G1 203 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 GNB5O14775 395 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 NDUFB2O95178 105 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 SLC2A10O95528 541 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 NADKO95544 446 aaPredicted RBP13.42□□□□□ -0.26
VPS33B-205ENST00000556096 BCL10O95999 233 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 PGCP20142 388 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 MST1P26927 711 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 ID4P47928 161 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 RAB15P59190 212 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 MED22Q15528 200 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 FAM199XQ6PEV8 388 aaPredicted RBP13.42□□□□□ -0.26
VPS33B-205ENST00000556096 CXXC5Q7LFL8 322 aaKnown RBP13.42□□□□□ -0.26
VPS33B-205ENST00000556096 CPOQ8IVL8 374 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 ZNF563Q8TA94 476 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 C8orf44Q96CB5 159 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 OR5M11Q96RB7 305 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 MGLLQ99685 303 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 ZPBPQ9BS86 351 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 STRADBQ9C0K7 418 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 EXOGQ9Y2C4 368 aaKnown RBP13.42□□□□□ -0.26
VPS33B-205ENST00000556096 ZNF337Q9Y3M9 751 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 ADAM10O14672 748 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 CD63P08962 238 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 PEPDP12955 493 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 ZNF182P17025 639 aaPredicted RBP13.42□□□□□ -0.26
VPS33B-205ENST00000556096 HK1P19367 917 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 SDHBP21912 280 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 NR4A1P22736 598 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 RGS6P49758 472 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 P2RX1P51575 399 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 TMED1Q13445 227 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 CBFBQ13951 182 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 SPCS2Q15005 226 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 DCAF12Q5T6F0 453 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 C19orf48Q6RUI8 117 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 GLRX5Q86SX6 157 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 AMER2Q8N7J2 671 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 RNF138Q8WVD3 245 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 TTC9Q92623 222 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 HGDQ93099 445 aa13.42□□□□□ -0.26
VPS33B-205ENST00000556096 PMEPA1Q969W9 287 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms