RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 H3F3AP84243 136 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 BSPH1Q075Z2 132 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 GNA13Q14344 377 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 PPA1Q15181 289 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 TSC22D1Q15714 1073 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 GPAT3Q53EU6 434 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 CEP85LQ5SZL2 805 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 FBXW9Q5XUX1 488 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 LRRC74BQ6ZQY2 392 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 ZG16BQ96DA0 208 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 MUCL1Q96DR8 90 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 TRMT61AQ96FX7 289 aaKnown RBP11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 TEX37Q96LM6 180 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 PANX1Q96RD7 426 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 TRIM2Q9C040 744 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 SLC38A1Q9H2H9 487 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 MTHFD2LQ9H903 347 aaPredicted RBP11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 KCNK9Q9NPC2 374 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 CTPS2Q9NRF8 586 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 THAP1Q9NVV9 213 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 MALT1Q9UDY8 824 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 PRSS50Q9UI38 385 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 LAMP3Q9UQV4 416 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 GPR45Q9Y5Y3 372 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 DSCAMO60469 2012 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 ARID1AO14497 2285 aa11.23□□□□□ -0.61
HNRNPC-221ENST00000555883 CCDC154A6NI56 674 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 OR5H1A6NKK0 313 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 EIF1BO60739 113 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 BCAS1O75363 584 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 LYZL6O75951 148 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 IL6P05231 212 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 IDO1P14902 403 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 UQCRBP14927 111 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 IGHV1-2P23083 117 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 CASP9P55211 416 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 UFM1P61960 85 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 CHRNEQ04844 493 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 CAPRIN1Q14444 709 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 OLIG3Q7RTU3 272 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 DTX2Q86UW9 622 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 RNF130Q86XS8 419 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 ADGRG3Q86Y34 549 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 ZNF100Q8IYN0 542 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 ZNF433Q8N7K0 673 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 SMAP2Q8WU79 429 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 GTPBP3Q969Y2 492 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 APH1AQ96BI3 265 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 MAELQ96JY0 434 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 ARL5BQ96KC2 179 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 OR52E6Q96RD3 313 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 FAIMQ9NVQ4 179 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 PNPOQ9NVS9 261 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 TMEM181Q9P2C4 612 aa11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 NOSIPQ9Y314 301 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 V9GYY5 206 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-221ENST00000555883 DSPPQ9NZW4 1301 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 DPRXA6NFQ7 191 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 CLOCKO15516 846 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 ADAM11O75078 769 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 KRT75O95678 551 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 DBIP07108 87 aaKnown RBP11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 CHRM4P08173 479 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 SOD3P08294 240 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 ZCCHC18P0CG32 403 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 TFPIP10646 304 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 IL12AP29459 219 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 SLC1A3P43003 542 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 POLR2HP52434 150 aaKnown RBP11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 GSTA3Q16772 222 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 ZSWIM7Q19AV6 140 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 PGGHGQ32M88 737 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 PDCD4Q53EL6 469 aaKnown RBP11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 HHATQ5VTY9 493 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 OR7E24Q6IFN5 339 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 MSANTD1Q6ZTZ1 278 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 Q71RC1 249 aaPredicted RBP11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 ZNF440Q8IYI8 595 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 DDIT4LQ96D03 193 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 ZBTB18Q99592 522 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 CENPHQ9H3R5 247 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 PIF1Q9H611 641 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 ASB6Q9NWX5 421 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 THUMPD1Q9NXG2 353 aaKnown RBP11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 TAS2R16Q9NYV7 291 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 MGAT4BQ9UQ53 548 aa11.21□□□□□ -0.61
HNRNPC-221ENST00000555883 NUP214P35658 2090 aaPredicted RBP11.21□□□□□ -0.62
HNRNPC-221ENST00000555883 FN1P02751 2386 aaKnown RBP11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 HEATR5AQ86XA9 2040 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 A0A1W2PP18 115 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 TMEM120BA0PK00 339 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 CFAP73A6NFT4 308 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 CLDN24A6NM45 220 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 SHISA9B4DS77 424 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 RFXANKO14593 260 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 MRPL33O75394 65 aaKnown RBP11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 IL7RP16871 459 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 EDNRAP25101 427 aa11.2□□□□□ -0.62
HNRNPC-221ENST00000555883 EPHA3P29320 983 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms