RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 RNF220Q5VTB9 566 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 EEF1A1P5Q5VTE0 462 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 TMPPEQ6ZT21 453 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 TMEM200AQ86VY9 491 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 OR6K3Q8NGY3 331 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 BBS10Q8TAM1 723 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 C10orf82Q8WW14 230 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 ZNF775Q96BV0 537 aaPredicted RBP12.18□□□□□ -0.46
SNX6-203ENST00000555416 LRRC46Q96FV0 321 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 ANKRD27Q96NW4 1050 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 WFIKKN1Q96NZ8 548 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 CGREF1Q99674 301 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 WFDC6Q9BQY6 131 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 SLC39A3Q9BRY0 314 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 SPATA9Q9BWV2 254 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 ADAM19Q9H013 955 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 LIME1Q9H400 295 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 C12orf49Q9H741 205 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 SERINC1Q9NRX5 453 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 TMED7Q9Y3B3 224 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 EMC9Q9Y3B6 208 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 CCDC168Q8NDH2 2452 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 FREM1Q5H8C1 2179 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 ABCA4P78363 2273 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 A0A1W2PPR1 153 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 SH3D21A4FU49 640 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 FXYD1O00168 92 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 ANGPT2O15123 496 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 SIAH2O43255 324 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 FESP07332 822 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 EPXP11678 715 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 IMPDH2P12268 514 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 PPIBP23284 216 aaKnown RBP12.17□□□□□ -0.46
SNX6-203ENST00000555416 AQP1P29972 269 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 UGT2B10P36537 528 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 SLC1A3P43003 542 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 POLR2HP52434 150 aaKnown RBP12.17□□□□□ -0.46
SNX6-203ENST00000555416 BNIP2Q12982 314 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 SCARB2Q14108 478 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 GNA13Q14344 377 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 LARS2Q15031 903 aaKnown RBP12.17□□□□□ -0.46
SNX6-203ENST00000555416 DAZAP2Q15038 168 aaPredicted RBP12.17□□□□□ -0.46
SNX6-203ENST00000555416 PRAMEF8Q5VWM4 474 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 PRAMEF7Q5VXH5 474 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 ANKRD34AQ69YU3 496 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 ZNF550Q7Z398 422 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 CADM2Q8N3J6 435 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 TSPEARQ8WU66 669 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 ZNF300Q96RE9 604 aaPredicted RBP12.17□□□□□ -0.46
SNX6-203ENST00000555416 PSD2Q9BQI7 771 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 PRR14Q9BWN1 585 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 TMEM38AQ9H6F2 299 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 TIGARQ9NQ88 270 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 RASSF1Q9NS23 344 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 KLHL28Q9NXS3 571 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 KLHL13Q9P2N7 655 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 TESMINQ9Y4I5 508 aa12.17□□□□□ -0.46
SNX6-203ENST00000555416 PRR14LQ5THK1 2151 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 TMEM247A6NEH6 219 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 C5orf58C9J3I9 102 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 SULT2B1O00204 365 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 ATP8B1O43520 1251 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 CYTIPO60759 359 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 PRKD3O94806 890 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 POU2F1P14859 743 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 ETS2P15036 469 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 NTF4P34130 210 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 GZMMP51124 257 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 RABL3Q5HYI8 236 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 REEP3Q6NUK4 255 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 STAC2Q6ZMT1 411 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.16□□□□□ -0.46
SNX6-203ENST00000555416 CCDC103Q8IW40 242 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 ZNF440Q8IYI8 595 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 SLC25A43Q8WUT9 341 aaPredicted RBP12.16□□□□□ -0.46
SNX6-203ENST00000555416 REXO5Q96IC2 774 aaKnown RBP12.16□□□□□ -0.46
SNX6-203ENST00000555416 SLC24A3Q9HC58 644 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 GLRX2Q9NS18 164 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 ARMCX1Q9P291 453 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 ZNF232Q9UNY5 417 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 USP22Q9UPT9 525 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 IFT52Q9Y366 437 aa12.16□□□□□ -0.46
SNX6-203ENST00000555416 ANKRD17O75179 2603 aaKnown RBP12.15□□□□□ -0.46
SNX6-203ENST00000555416 AKAP9Q99996 3911 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 LOC100653049A0A140TA62 436 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 EVPLLA8MZ36 301 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 KRT34O76011 436 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 PMS2P2O95744 297 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 YES1P07947 543 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 HTR2AP28223 471 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 PEX19P40855 299 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 KCNJ5P48544 419 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 GYS2P54840 703 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 PCBP3P57721 371 aaKnown RBP12.15□□□□□ -0.46
SNX6-203ENST00000555416 DMTNQ08495 405 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 RASGEF1BQ0VAM2 473 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 RNPS1Q15287 305 aaKnown RBP12.15□□□□□ -0.46
SNX6-203ENST00000555416 POU4F3Q15319 338 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 TSC22D1Q15714 1073 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 ABLIM2Q6H8Q1 611 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms